RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 WDR62O43379 1518 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 TNNT1P13805 278 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.049e-7■■□□□ 12.7
SMARCA4-205ENST00000450717 FAM193AP78312 1265 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 TFIP11Q9UBB9 837 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 CACNA2D4Q7Z3S7 1137 aa15.27■□□□□ 0.04
SMARCA4-205ENST00000450717 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 LDHCP07864 332 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 LARP6Q9BRS8 491 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 CENPHQ9H3R5 247 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.03
SMARCA4-205ENST00000450717 ATP5J2-PTCD1G3V325 749 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 USO1O60763 962 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 AMPD3Q01432 767 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 ZNF165P49910 485 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 ENOX2Q16206 610 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 TESK2Q96S53 571 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 GPTP24298 496 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 CETN2P41208 172 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 PDE4BQ07343 736 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC150Q8NCX0 1101 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 CUL5Q93034 780 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
SMARCA4-205ENST00000450717 ASXL2Q76L83 1435 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 RPGRQ92834 1020 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 EHMT1Q9H9B1 1298 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 PIP4K2BP78356 416 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 WDR7Q9Y4E6 1490 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
SMARCA4-205ENST00000450717 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 RBM27Q9P2N5 1060 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■■■ 30.1
SMARCA4-205ENST00000450717 CCDC96Q2M329 555 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 TCP11L1Q9NUJ3 509 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 FLT4P35916 1363 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 GRM8O00222 908 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 CALML4Q96GE6 196 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 KRT23Q9C075 422 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 ABCC1P33527 1531 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 BAG3O95817 575 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 TAF3Q5VWG9 929 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
SMARCA4-205ENST00000450717 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 BMP15O95972 392 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 USP8P40818 1118 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 EZRP15311 586 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 TMTC2Q8N394 836 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 PPP1R1BQ9UD71 204 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 TAX1BP1Q86VP1 789 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 NPATQ14207 1427 aa15.23■□□□□ 0.03
SMARCA4-205ENST00000450717 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 BRF1Q92994 677 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 CNNM2Q9H8M5 875 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 HAND2P61296 217 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 COL17A1Q9UMD9 1497 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 VAMP4O75379 141 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 IL15P40933 162 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 XAGE3Q8WTP9 111 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
SMARCA4-205ENST00000450717 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms