RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 POTEDQ86YR6 584 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
LSM5-208ENST00000450169 ANO2Q9NQ90 1003 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 KCND1Q9NSA2 647 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 ABCA6Q8N139 1617 aa10.14□□□□□ -0.79
LSM5-208ENST00000450169 SART3Q15020 963 aaKnown RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 EXOC4Q96A65 974 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 TNMDQ9H2S6 317 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 PSD3Q9NYI0 1048 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.13□□□□□ -0.795e-7■■□□□ 14.2
LSM5-208ENST00000450169 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 VWDEQ8N2E2 1590 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 ATP10DQ9P241 1426 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 VAMP4O75379 141 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 LMAN1P49257 510 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 ZNF165P49910 485 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 CCZ1BP86790 482 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 CCZ1P86791 482 aaPredicted RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 SNW1Q13573 536 aaKnown RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 SMC1AQ14683 1233 aaKnown RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 CCDC91Q7Z6B0 441 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 UBXN4Q92575 508 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 CARD10Q9BWT7 1032 aa10.13□□□□□ -0.79
LSM5-208ENST00000450169 API5Q9BZZ5 524 aaKnown RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 ORC3Q9UBD5 711 aaPredicted RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 CFAP65Q6ZU64 1925 aaKnown RBP10.13□□□□□ -0.79
LSM5-208ENST00000450169 SSH2Q76I76 1423 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 POGZQ7Z3K3 1410 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 MYO3AQ8NEV4 1616 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 IVLP07476 585 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 ACTN2P35609 894 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 CHMP3Q9Y3E7 222 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 TRPM2O94759 1503 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 TET3O43151 1660 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 NSD2O96028 1365 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 SEC31AO94979 1220 aaKnown RBP10.12□□□□□ -0.79
LSM5-208ENST00000450169 CFAP70Q5T0N1 1121 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
LSM5-208ENST00000450169 MRFAP1L1Q96HT8 127 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 OSBPL3Q9H4L5 887 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 DONSONQ9NYP3 566 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
LSM5-208ENST00000450169 ARHGEF40Q8TER5 1519 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 KIF3BO15066 747 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 SASH3O75995 380 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 TBC1D8O95759 1140 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 LIG1P18858 919 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 PDE1AP54750 535 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 SARM1Q6SZW1 724 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 PPM1EQ8WY54 764 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 KIF12Q96FN5 646 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 CXorf56Q9H5V9 222 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 ADAM21Q9UKJ8 722 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 FRMPD1Q5SYB0 1578 aa10.11□□□□□ -0.79
LSM5-208ENST00000450169 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 CEP85Q6P2H3 762 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 SUGP1Q8IWZ8 645 aaKnown RBP10.1□□□□□ -0.79
LSM5-208ENST00000450169 PARP9Q8IXQ6 854 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 TSPYL6Q8N831 410 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 CCDC102AQ96A19 550 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 DNAJC25Q9H1X3 360 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 EIF3CLB5ME19 914 aaKnown RBP10.1□□□□□ -0.79
LSM5-208ENST00000450169 GOLGA6L19H0YKK7 550 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 SWT1Q5T5J6 900 aaKnown RBP10.1□□□□□ -0.79
LSM5-208ENST00000450169 RBM43Q6ZSC3 357 aaKnown RBP10.1□□□□□ -0.79
LSM5-208ENST00000450169 CCDC34Q96HJ3 373 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 EIF3CQ99613 913 aaKnown RBP10.1□□□□□ -0.79
LSM5-208ENST00000450169 DACT1Q9NYF0 836 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 HECW2Q9P2P5 1572 aa10.1□□□□□ -0.79
LSM5-208ENST00000450169 KIF1CO43896 1103 aaKnown RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 CAVIN2O95810 425 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 TPM1P09493 284 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 GSCP56915 257 aaPredicted RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 MCTP2Q6DN12 878 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 TTC6Q86TZ1 520 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 DDX19AQ9NUU7 478 aaKnown RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 MTMR6Q9Y217 621 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 MAP3K4Q9Y6R4 1608 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 TTC21BQ7Z4L5 1316 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 TUBB4AP04350 444 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 CCDC158Q5M9N0 1113 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 CC2D1AQ6P1N0 951 aaPredicted RBP10.09□□□□□ -0.79
LSM5-208ENST00000450169 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms