RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
SHMT2-203ENST00000449049 GRM8O00222 908 aa17.69■□□□□ 0.42
SHMT2-203ENST00000449049 GYS1P13807 737 aa17.69■□□□□ 0.42
SHMT2-203ENST00000449049 GPTP24298 496 aa17.69■□□□□ 0.42
SHMT2-203ENST00000449049 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-203ENST00000449049 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
SHMT2-203ENST00000449049 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-203ENST00000449049 NIP7Q9Y221 180 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHMT2-203ENST00000449049 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
SHMT2-203ENST00000449049 H7C1W4 665 aa17.67■□□□□ 0.42
SHMT2-203ENST00000449049 UBTFL1P0CB47 393 aaPredicted RBP17.66■□□□□ 0.42
SHMT2-203ENST00000449049 CASP7P55210 303 aa17.66■□□□□ 0.42
SHMT2-203ENST00000449049 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-203ENST00000449049 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
SHMT2-203ENST00000449049 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-203ENST00000449049 MSH5O43196 834 aa17.65■□□□□ 0.42
SHMT2-203ENST00000449049 GNAI2P04899 355 aa17.65■□□□□ 0.42
SHMT2-203ENST00000449049 LAMB2P55268 1798 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 NTSR2O95665 410 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 HDAC5Q9UQL6 1122 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 CARMIL3Q8ND23 1372 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 CASZ1Q86V15 1759 aa17.64■□□□□ 0.41
SHMT2-203ENST00000449049 NFIXQ14938 502 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
SHMT2-203ENST00000449049 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 TM4SF1P30408 202 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 PCDHB15Q9Y5E8 787 aa17.63■□□□□ 0.41
SHMT2-203ENST00000449049 LRRFIP2Q9Y608 721 aaKnown RBP17.63■□□□□ 0.41
SHMT2-203ENST00000449049 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
SHMT2-203ENST00000449049 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
SHMT2-203ENST00000449049 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
SHMT2-203ENST00000449049 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-203ENST00000449049 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
SHMT2-203ENST00000449049 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
SHMT2-203ENST00000449049 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
SHMT2-203ENST00000449049 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
SHMT2-203ENST00000449049 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
SHMT2-203ENST00000449049 CEP85Q6P2H3 762 aa17.6■□□□□ 0.41
SHMT2-203ENST00000449049 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
SHMT2-203ENST00000449049 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-203ENST00000449049 RPAP2Q8IXW5 612 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-203ENST00000449049 SLC16A10Q8TF71 515 aa17.6■□□□□ 0.41
SHMT2-203ENST00000449049 PDGFDQ9GZP0 370 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-203ENST00000449049 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
SHMT2-203ENST00000449049 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
SHMT2-203ENST00000449049 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
SHMT2-203ENST00000449049 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
SHMT2-203ENST00000449049 DDR1Q08345 913 aa17.59■□□□□ 0.41
SHMT2-203ENST00000449049 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
SHMT2-203ENST00000449049 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
SHMT2-203ENST00000449049 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-203ENST00000449049 FOXO4P98177 505 aa17.58■□□□□ 0.4
SHMT2-203ENST00000449049 MTX1Q13505 466 aa17.58■□□□□ 0.4
SHMT2-203ENST00000449049 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-203ENST00000449049 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
SHMT2-203ENST00000449049 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
SHMT2-203ENST00000449049 TPTE2Q6XPS3 522 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 MYH3P11055 1940 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
SHMT2-203ENST00000449049 R3HDM1Q15032 1099 aaKnown RBP17.57■□□□□ 0.4
SHMT2-203ENST00000449049 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 RIC1Q4ADV7 1423 aa17.57■□□□□ 0.4
SHMT2-203ENST00000449049 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
SHMT2-203ENST00000449049 SERPINB2P05120 415 aa17.56■□□□□ 0.4
SHMT2-203ENST00000449049 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
SHMT2-203ENST00000449049 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
SHMT2-203ENST00000449049 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
SHMT2-203ENST00000449049 PDE8AO60658 829 aa17.56■□□□□ 0.4
SHMT2-203ENST00000449049 MMP10P09238 476 aa17.55■□□□□ 0.4
SHMT2-203ENST00000449049 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
SHMT2-203ENST00000449049 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
SHMT2-203ENST00000449049 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
SHMT2-203ENST00000449049 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 SSH3Q8TE77 659 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 IGHDP01880 384 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 CSF1RP07333 972 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-203ENST00000449049 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-203ENST00000449049 CTSWP56202 376 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 POLA2Q14181 598 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-203ENST00000449049 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
SHMT2-203ENST00000449049 SRGAP3O43295 1099 aa17.53■□□□□ 0.4
SHMT2-203ENST00000449049 HMMRO75330 724 aa17.53■□□□□ 0.4
SHMT2-203ENST00000449049 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.4
SHMT2-203ENST00000449049 ST5P78524 1137 aa17.52■□□□□ 0.4
SHMT2-203ENST00000449049 TTLL11Q8NHH1 800 aa17.52■□□□□ 0.4
SHMT2-203ENST00000449049 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms