RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 DOT1LQ8TEK3 1739 aa13□□□□□ -0.33
VIPAS39-203ENST00000448935 GSPT1P15170 499 aaKnown RBP13□□□□□ -0.33
VIPAS39-203ENST00000448935 PDE1AP54750 535 aa13□□□□□ -0.33
VIPAS39-203ENST00000448935 ATG3Q9NT62 314 aa13□□□□□ -0.33
VIPAS39-203ENST00000448935 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 MX1P20591 662 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 NBPF10Q6P3W6 841 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 NBPF15Q8N660 670 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 A1BGP04217 495 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-203ENST00000448935 OTUD7AQ8TE49 926 aaPredicted RBP12.98□□□□□ -0.33
VIPAS39-203ENST00000448935 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
VIPAS39-203ENST00000448935 SDSP20132 328 aa12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
VIPAS39-203ENST00000448935 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.96□□□□□ -0.33
VIPAS39-203ENST00000448935 A0A087WZG4 1122 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 VPS72Q15906 364 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 ARHGEF1Q92888 912 aaKnown RBP12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
VIPAS39-203ENST00000448935 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 H7C1W4 665 aa12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 ERC2O15083 957 aa12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 REC8O95072 547 aa12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
VIPAS39-203ENST00000448935 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 TJP1Q07157 1748 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 TCIRG1Q13488 830 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
VIPAS39-203ENST00000448935 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-203ENST00000448935 CASP7P55210 303 aa12.92□□□□□ -0.34
VIPAS39-203ENST00000448935 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-203ENST00000448935 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
VIPAS39-203ENST00000448935 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
VIPAS39-203ENST00000448935 TRIM6-TRIM34B2RNG4 842 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 GLRX3O76003 335 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 ZNF831Q5JPB2 1677 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
VIPAS39-203ENST00000448935 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-203ENST00000448935 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-203ENST00000448935 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
VIPAS39-203ENST00000448935 ECHDC1Q9NTX5 307 aa12.9□□□□□ -0.34
VIPAS39-203ENST00000448935 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 HSCBQ8IWL3 235 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 USP21Q9UK80 565 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 RREB1Q92766 1687 aa12.89□□□□□ -0.35
VIPAS39-203ENST00000448935 A0A0G2JS52 829 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 SASH1O94885 1247 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 RFX5P48382 616 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms