RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 LEKR1Q6ZMV7 388 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 GPATCH11Q8N954 259 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 UBXN6Q9BZV1 441 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 F6X3S4 739 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 EXOC4Q96A65 974 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 ADAM21Q9UKJ8 722 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 TUBB4AP04350 444 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 PSEN1P49768 467 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 ME3Q16798 604 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 REXO1L1PQ8IX06 675 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 CYP46A1Q9Y6A2 500 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 FANCAO15360 1455 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 SASH3O75995 380 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 URI1O94763 535 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 ACTN2P35609 894 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 STX1AQ16623 288 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 IL1RAPL2Q9NP60 686 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
SYNPO2-204ENST00000448416 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.64
SYNPO2-204ENST00000448416 DEF6Q9H4E7 631 aa11.02□□□□□ -0.64
SYNPO2-204ENST00000448416 ADGRB1O14514 1584 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 ZFYVE9O95405 1425 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 CLGNO14967 610 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 CCDC158Q5M9N0 1113 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 CARD6Q9BX69 1037 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 GLI2P10070 1586 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 MROH2AA6NES4 1674 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 ETF1P62495 437 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-204ENST00000448416 PNMA6EA0A0J9YXQ4 647 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 EVCP57679 992 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 GNL2Q13823 731 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 CC2D1AQ6P1N0 951 aaPredicted RBP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 ARFGAP3Q9NP61 516 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 PSD3Q9NYI0 1048 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 EFCAB8A8MWE9 144 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 IVLP07476 585 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 MAGEA9P43362 315 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 TADA3O75528 432 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 SFPQP23246 707 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 ADCK5Q3MIX3 580 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 EPC1Q9H2F5 836 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 STK26Q9P289 416 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
SYNPO2-204ENST00000448416 GNAI3P08754 354 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 ASXL2Q76L83 1435 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
SYNPO2-204ENST00000448416 AOX1Q06278 1338 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
SYNPO2-204ENST00000448416 PRPF40BQ6NWY9 871 aaKnown RBP11□□□□□ -0.65
SYNPO2-204ENST00000448416 IQUBQ8NA54 791 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 CCDC150Q8NCX0 1101 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 ATP8B2P98198 1209 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 TMC6Q7Z403 805 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 CNTROBQ8N137 903 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 AOPEPQ8N6M6 819 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 FBXW7Q969H0 707 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
SYNPO2-204ENST00000448416 A0A087WWV3 80 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 SMC2O95347 1197 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 ANO10Q9NW15 660 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 CTAGE5O15320 804 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 CEP57L1Q8IYX8 460 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 LARP1Q6PKG0 1096 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 G2E3Q7L622 706 aa10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 DHX40Q8IX18 779 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 MINK1Q8N4C8 1332 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-204ENST00000448416 CCP110O43303 1012 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms