RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TCIRG1Q13488 830 aa22.52■■□□□ 1.2
HLCS-205ENST00000448340 BICDL1Q6ZP65 573 aa22.52■■□□□ 1.2
HLCS-205ENST00000448340 BCL2L13Q9BXK5 485 aa22.52■■□□□ 1.2
HLCS-205ENST00000448340 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
HLCS-205ENST00000448340 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 PI4KAP2A4QPH2 592 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 PRELPP51888 382 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 COL13A1Q5TAT6 717 aaPredicted RBP22.51■■□□□ 1.19
HLCS-205ENST00000448340 ZNF34Q8IZ26 560 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 PI4KAP1Q8N8J0 262 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 PCNTO95613 3336 aa22.51■■□□□ 1.19
HLCS-205ENST00000448340 MAP3K2Q9Y2U5 619 aa22.5■■□□□ 1.19
HLCS-205ENST00000448340 PTPRCP08575 1304 aa22.5■■□□□ 1.19
HLCS-205ENST00000448340 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
HLCS-205ENST00000448340 ANKRD36CQ5JPF3 1778 aa22.49■■□□□ 1.19
HLCS-205ENST00000448340 METTL22Q9BUU2 404 aaPredicted RBP22.49■■□□□ 1.19
HLCS-205ENST00000448340 SERPINB2P05120 415 aa22.48■■□□□ 1.19
HLCS-205ENST00000448340 PARP10Q53GL7 1025 aa22.48■■□□□ 1.19
HLCS-205ENST00000448340 ZC3H4Q9UPT8 1303 aaKnown RBP22.48■■□□□ 1.19
HLCS-205ENST00000448340 GPTP24298 496 aa22.47■■□□□ 1.19
HLCS-205ENST00000448340 RASSF7Q02833 373 aa22.47■■□□□ 1.19
HLCS-205ENST00000448340 TRIM28Q13263 835 aaKnown RBP22.47■■□□□ 1.19
HLCS-205ENST00000448340 DNAAF4Q8WXU2 420 aa22.47■■□□□ 1.19
HLCS-205ENST00000448340 ISCA1Q9BUE6 129 aa22.47■■□□□ 1.19
HLCS-205ENST00000448340 BCAR3O75815 825 aa22.46■■□□□ 1.19
HLCS-205ENST00000448340 SMC1BQ8NDV3 1235 aa22.46■■□□□ 1.19
HLCS-205ENST00000448340 NOB1Q9ULX3 412 aaKnown RBP22.46■■□□□ 1.19
HLCS-205ENST00000448340 UBN2Q6ZU65 1347 aa22.46■■□□□ 1.19
HLCS-205ENST00000448340 KIF16BQ96L93 1317 aa22.46■■□□□ 1.19
HLCS-205ENST00000448340 NRXN2Q9P2S2 1712 aa22.45■■□□□ 1.19
HLCS-205ENST00000448340 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.19
HLCS-205ENST00000448340 SBF1O95248 1867 aa22.45■■□□□ 1.19
HLCS-205ENST00000448340 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
HLCS-205ENST00000448340 NBPF5PQ86XG9 351 aaPredicted RBP22.45■■□□□ 1.18
HLCS-205ENST00000448340 MYD88Q99836 296 aa22.45■■□□□ 1.18
HLCS-205ENST00000448340 GLTPD2A6NH11 291 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 LMNB1P20700 586 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 PPP1R42Q7Z4L9 355 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 NLRP10Q86W26 655 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 NYXQ9GZU5 481 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
HLCS-205ENST00000448340 RCAN3Q9UKA8 241 aa22.44■■□□□ 1.18
HLCS-205ENST00000448340 F6X3S4 739 aa22.43■■□□□ 1.18
HLCS-205ENST00000448340 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
HLCS-205ENST00000448340 SUSD4Q5VX71 490 aa22.43■■□□□ 1.18
HLCS-205ENST00000448340 CNBD1Q8NA66 436 aa22.42■■□□□ 1.18
HLCS-205ENST00000448340 CCDC191Q8NCU4 936 aa22.42■■□□□ 1.18
HLCS-205ENST00000448340 UTP14AQ9BVJ6 771 aaKnown RBP22.42■■□□□ 1.18
HLCS-205ENST00000448340 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
HLCS-205ENST00000448340 TNRC6CQ9HCJ0 1690 aaKnown RBP22.42■■□□□ 1.18
HLCS-205ENST00000448340 FAM177BA6PVY3 158 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 NPHP1O15259 732 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 IGKV5-2P06315 115 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 VEGFAP15692 232 aaPredicted RBP22.41■■□□□ 1.18
HLCS-205ENST00000448340 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 LINS1Q8NG48 757 aa22.41■■□□□ 1.18
HLCS-205ENST00000448340 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
HLCS-205ENST00000448340 POTECB2RU33 542 aa22.4■■□□□ 1.18
HLCS-205ENST00000448340 NFKBIEO00221 500 aa22.4■■□□□ 1.18
HLCS-205ENST00000448340 NTSR2O95665 410 aa22.4■■□□□ 1.18
HLCS-205ENST00000448340 CWC25Q9NXE8 425 aaPredicted RBP22.4■■□□□ 1.18
HLCS-205ENST00000448340 NEURL1BA8MQ27 555 aa22.39■■□□□ 1.17
HLCS-205ENST00000448340 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.17
HLCS-205ENST00000448340 ST5P78524 1137 aa22.39■■□□□ 1.17
HLCS-205ENST00000448340 BEND3Q5T5X7 828 aa22.39■■□□□ 1.17
HLCS-205ENST00000448340 SLC4A10Q6U841 1118 aa22.39■■□□□ 1.17
HLCS-205ENST00000448340 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
HLCS-205ENST00000448340 CWF19L2Q2TBE0 894 aaKnown RBP22.38■■□□□ 1.17
HLCS-205ENST00000448340 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
HLCS-205ENST00000448340 C2CD5Q86YS7 1000 aa22.38■■□□□ 1.17
HLCS-205ENST00000448340 TRMT112Q9UI30 125 aaKnown RBP22.38■■□□□ 1.17
HLCS-205ENST00000448340 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
HLCS-205ENST00000448340 BRIP1Q9BX63 1249 aa22.37■■□□□ 1.17
HLCS-205ENST00000448340 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
HLCS-205ENST00000448340 ALDH1L1O75891 902 aa22.36■■□□□ 1.17
HLCS-205ENST00000448340 ERFEQ4G0M1 354 aa22.36■■□□□ 1.17
HLCS-205ENST00000448340 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
HLCS-205ENST00000448340 SRCIN1Q9C0H9 1055 aa22.36■■□□□ 1.17
HLCS-205ENST00000448340 H0YIN7 160 aa22.35■■□□□ 1.17
HLCS-205ENST00000448340 TRIM27P14373 513 aa22.35■■□□□ 1.17
HLCS-205ENST00000448340 GCKRQ14397 625 aa22.35■■□□□ 1.17
HLCS-205ENST00000448340 SLC10A5Q5PT55 438 aa22.35■■□□□ 1.17
HLCS-205ENST00000448340 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
HLCS-205ENST00000448340 ZBTB38Q8NAP3 1195 aaPredicted RBP22.35■■□□□ 1.17
HLCS-205ENST00000448340 PCCAP05165 728 aaPredicted RBP22.34■■□□□ 1.17
HLCS-205ENST00000448340 PDE6BP35913 854 aa22.34■■□□□ 1.17
HLCS-205ENST00000448340 TNS4Q8IZW8 715 aa22.34■■□□□ 1.17
HLCS-205ENST00000448340 DLEC1Q9Y238 1755 aa22.34■■□□□ 1.17
HLCS-205ENST00000448340 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
HLCS-205ENST00000448340 ANKRD31Q8N7Z5 1873 aa22.33■■□□□ 1.17
HLCS-205ENST00000448340 CCT4P50991 539 aaKnown RBP22.33■■□□□ 1.17
HLCS-205ENST00000448340 FAM89AQ96GI7 184 aa22.33■■□□□ 1.17
HLCS-205ENST00000448340 PDZRN3Q9UPQ7 1066 aa22.33■■□□□ 1.17
HLCS-205ENST00000448340 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
HLCS-205ENST00000448340 ABCC4O15439 1325 aa22.32■■□□□ 1.16
HLCS-205ENST00000448340 KLRG2A4D1S0 409 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms