RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CAVIN2O95810 425 aa22.66■■□□□ 1.22
HMGA1-205ENST00000447654 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
HMGA1-205ENST00000447654 DRC7Q8IY82 874 aa22.66■■□□□ 1.22
HMGA1-205ENST00000447654 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
HMGA1-205ENST00000447654 PNMA6AP0CW24 399 aaPredicted RBP22.65■■□□□ 1.22
HMGA1-205ENST00000447654 TDRD7Q8NHU6 1098 aaKnown RBP22.65■■□□□ 1.22
HMGA1-205ENST00000447654 L2HGDHQ9H9P8 463 aa22.65■■□□□ 1.22
HMGA1-205ENST00000447654 SETD1BQ9UPS6 1966 aaKnown RBP22.65■■□□□ 1.22
HMGA1-205ENST00000447654 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
HMGA1-205ENST00000447654 IQUBQ8NA54 791 aa22.65■■□□□ 1.22
HMGA1-205ENST00000447654 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
HMGA1-205ENST00000447654 ARGLU1Q9NWB6 273 aaPredicted RBP22.65■■□□□ 1.22
HMGA1-205ENST00000447654 ERBB3P21860 1342 aa22.64■■□□□ 1.22
HMGA1-205ENST00000447654 NOM1Q5C9Z4 860 aaKnown RBP22.64■■□□□ 1.21
HMGA1-205ENST00000447654 SYT10Q6XYQ8 523 aa22.64■■□□□ 1.21
HMGA1-205ENST00000447654 PSD3Q9NYI0 1048 aa22.64■■□□□ 1.21
HMGA1-205ENST00000447654 NWD1Q149M9 1564 aa22.64■■□□□ 1.21
HMGA1-205ENST00000447654 PLA2G4AP47712 749 aa22.63■■□□□ 1.21
HMGA1-205ENST00000447654 MAP3K11Q16584 847 aa22.63■■□□□ 1.21
HMGA1-205ENST00000447654 C14orf37Q86TY3 774 aa22.63■■□□□ 1.21
HMGA1-205ENST00000447654 UBXN6Q9BZV1 441 aa22.63■■□□□ 1.21
HMGA1-205ENST00000447654 ATG3Q9NT62 314 aa22.63■■□□□ 1.21
HMGA1-205ENST00000447654 ZRANB2O95218 330 aaKnown RBP eCLIP22.62■■□□□ 1.21
HMGA1-205ENST00000447654 F13A1P00488 732 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 KRBA2Q6ZNG9 492 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 GOLGA5Q8TBA6 731 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 CACTINQ8WUQ7 758 aaKnown RBP22.62■■□□□ 1.21
HMGA1-205ENST00000447654 ZNF592Q92610 1267 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
HMGA1-205ENST00000447654 FILIP1Q7Z7B0 1213 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 MRVI1Q9Y6F6 885 aa22.62■■□□□ 1.21
HMGA1-205ENST00000447654 STX6O43752 255 aa22.61■■□□□ 1.21
HMGA1-205ENST00000447654 TRIM5Q9C035 493 aa22.61■■□□□ 1.21
HMGA1-205ENST00000447654 TYRO3Q06418 890 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 ZSCAN26Q16670 478 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 ESCO1Q5FWF5 840 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 NFATC2IPQ8NCF5 419 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 USP54Q70EL1 1684 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 A0A1B0GUL7 405 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 CLCN6P51797 869 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 LRRC8AQ8IWT6 810 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 C16orf71Q8IYS4 520 aaPredicted RBP22.6■■□□□ 1.21
HMGA1-205ENST00000447654 FBXO18Q8NFZ0 1043 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 ESYT1Q9BSJ8 1104 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
HMGA1-205ENST00000447654 ADGRL3Q9HAR2 1447 aa22.6■■□□□ 1.21
HMGA1-205ENST00000447654 SRLQ86TD4 932 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 GTF3C6Q969F1 213 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 BCCIPQ9P287 314 aaKnown RBP eCLIP22.59■■□□□ 1.21
HMGA1-205ENST00000447654 CLIP2Q9UDT6 1046 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 ATP10DQ9P241 1426 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 SARM1Q6SZW1 724 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 AK7Q96M32 723 aa22.59■■□□□ 1.21
HMGA1-205ENST00000447654 NPHP4O75161 1426 aaPredicted RBP22.59■■□□□ 1.21
HMGA1-205ENST00000447654 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.21
HMGA1-205ENST00000447654 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.21
HMGA1-205ENST00000447654 ORAI2Q96SN7 254 aa22.58■■□□□ 1.21
HMGA1-205ENST00000447654 CBX8Q9HC52 389 aa22.58■■□□□ 1.21
HMGA1-205ENST00000447654 APPP05067 770 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 TPM1P09493 284 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 TMCO3Q6UWJ1 677 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 CCDC191Q8NCU4 936 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 NUP62CLQ9H1M0 184 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 NRBP1Q9UHY1 535 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 RBM43Q6ZSC3 357 aaKnown RBP22.57■■□□□ 1.2
HMGA1-205ENST00000447654 NEK11Q8NG66 645 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 MRFAP1L1Q96HT8 127 aa22.57■■□□□ 1.2
HMGA1-205ENST00000447654 C10orf67Q8IYJ2 551 aa22.56■■□□□ 1.2
HMGA1-205ENST00000447654 LOC102724159A0A0B4J2E5 919 aa22.56■■□□□ 1.2
HMGA1-205ENST00000447654 FIBPO43427 364 aa22.56■■□□□ 1.2
HMGA1-205ENST00000447654 PWP2Q15269 919 aaKnown RBP22.56■■□□□ 1.2
HMGA1-205ENST00000447654 EXOC4Q96A65 974 aa22.56■■□□□ 1.2
HMGA1-205ENST00000447654 PLEKHG2Q9H7P9 1386 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 CCDC93Q567U6 631 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 LUZP1Q86V48 1076 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 CCAR2Q8N163 923 aaKnown RBP22.55■■□□□ 1.2
HMGA1-205ENST00000447654 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.55■■□□□ 1.2
HMGA1-205ENST00000447654 TUBGCP6Q96RT7 1819 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.55■■□□□ 1.2
HMGA1-205ENST00000447654 IVLP07476 585 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 SYT1P21579 422 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 OTUD7AQ8TE49 926 aaPredicted RBP22.55■■□□□ 1.2
HMGA1-205ENST00000447654 JRKLQ9Y4A0 524 aa22.55■■□□□ 1.2
HMGA1-205ENST00000447654 LTN1O94822 1766 aa22.54■■□□□ 1.2
HMGA1-205ENST00000447654 PSME1Q06323 249 aa22.54■■□□□ 1.2
HMGA1-205ENST00000447654 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
HMGA1-205ENST00000447654 RRP15Q9Y3B9 282 aaKnown RBP22.54■■□□□ 1.2
HMGA1-205ENST00000447654 NFAT5O94916 1531 aa22.54■■□□□ 1.2
HMGA1-205ENST00000447654 DDX19AQ9NUU7 478 aaKnown RBP22.53■■□□□ 1.2
HMGA1-205ENST00000447654 MAGEA9P43362 315 aa22.53■■□□□ 1.2
HMGA1-205ENST00000447654 DHX8Q14562 1220 aaKnown RBP22.53■■□□□ 1.2
HMGA1-205ENST00000447654 PALD1Q9ULE6 856 aa22.53■■□□□ 1.2
HMGA1-205ENST00000447654 KCNJ6P48051 423 aa22.52■■□□□ 1.2
HMGA1-205ENST00000447654 G2E3Q7L622 706 aa22.52■■□□□ 1.2
HMGA1-205ENST00000447654 IL17REQ8NFR9 667 aa22.52■■□□□ 1.2
HMGA1-205ENST00000447654 SMARCE1Q969G3 411 aa22.52■■□□□ 1.2
HMGA1-205ENST00000447654 SRRTQ9BXP5 876 aaKnown RBP22.52■■□□□ 1.2
HMGA1-205ENST00000447654 SKILP12757 684 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms