RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
LIN54-203ENST00000446851 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 RRP1P56182 461 aaKnown RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
LIN54-203ENST00000446851 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
LIN54-203ENST00000446851 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
LIN54-203ENST00000446851 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
LIN54-203ENST00000446851 GRM8O00222 908 aa12.86□□□□□ -0.35
LIN54-203ENST00000446851 RLBP1P12271 317 aa12.86□□□□□ -0.35
LIN54-203ENST00000446851 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
LIN54-203ENST00000446851 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
LIN54-203ENST00000446851 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 SRGAP3O43295 1099 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 KLHDC4Q8TBB5 520 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 GCKRQ14397 625 aa12.85□□□□□ -0.35
LIN54-203ENST00000446851 PTPRCP08575 1304 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
LIN54-203ENST00000446851 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 C21orf2O43822 256 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 DPEP1P16444 411 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
LIN54-203ENST00000446851 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
LIN54-203ENST00000446851 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
LIN54-203ENST00000446851 IGKV5-2P06315 115 aa12.83□□□□□ -0.35
LIN54-203ENST00000446851 GNAI3P08754 354 aa12.83□□□□□ -0.35
LIN54-203ENST00000446851 PDE6BP35913 854 aa12.83□□□□□ -0.35
LIN54-203ENST00000446851 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.35
LIN54-203ENST00000446851 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.35
LIN54-203ENST00000446851 VPS37DQ86XT2 251 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 BTAF1O14981 1849 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
LIN54-203ENST00000446851 GNAI2P04899 355 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
LIN54-203ENST00000446851 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
LIN54-203ENST00000446851 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 HDAC5Q9UQL6 1122 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
LIN54-203ENST00000446851 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
LIN54-203ENST00000446851 TRMT2AQ8IZ69 625 aaKnown RBP12.82□□□□□ -0.36
LIN54-203ENST00000446851 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
LIN54-203ENST00000446851 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
LIN54-203ENST00000446851 ANKRD18BA2A2Z9 1011 aa12.81□□□□□ -0.36
LIN54-203ENST00000446851 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
LIN54-203ENST00000446851 BICC1Q9H694 974 aaKnown RBP12.81□□□□□ -0.36
LIN54-203ENST00000446851 PIM2Q9P1W9 311 aa12.81□□□□□ -0.36
LIN54-203ENST00000446851 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
LIN54-203ENST00000446851 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
LIN54-203ENST00000446851 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
LIN54-203ENST00000446851 PLEKHG2Q9H7P9 1386 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIN54-203ENST00000446851 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
LIN54-203ENST00000446851 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 ITGA6P23229 1130 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 GREM2Q9H772 168 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
LIN54-203ENST00000446851 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
LIN54-203ENST00000446851 JAG2Q9Y219 1238 aa12.8□□□□□ -0.36
LIN54-203ENST00000446851 PDE8AO60658 829 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 EXOC6BQ9Y2D4 811 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 TAF5LO75529 589 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 ZNF34Q8IZ26 560 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
LIN54-203ENST00000446851 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
LIN54-203ENST00000446851 ADCY9O60503 1353 aa12.79□□□□□ -0.36
LIN54-203ENST00000446851 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
LIN54-203ENST00000446851 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 GPR101Q96P66 508 aaPredicted RBP12.78□□□□□ -0.36
LIN54-203ENST00000446851 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 MRC1P22897 1456 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 SNAP23O00161 211 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 HMMRO75330 724 aa12.78□□□□□ -0.36
LIN54-203ENST00000446851 ITGB4P16144 1822 aa12.77□□□□□ -0.36
LIN54-203ENST00000446851 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.36
LIN54-203ENST00000446851 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.36
LIN54-203ENST00000446851 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.36
LIN54-203ENST00000446851 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.37
LIN54-203ENST00000446851 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
LIN54-203ENST00000446851 NTSR2O95665 410 aa12.77□□□□□ -0.37
LIN54-203ENST00000446851 TM4SF1P30408 202 aa12.77□□□□□ -0.37
LIN54-203ENST00000446851 CTSWP56202 376 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms