RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PARP10Q53GL7 1025 aa30.73■■■□□ 2.51
C9orf3-207ENST00000445181 RIC3Q7Z5B4 369 aa30.73■■■□□ 2.51
C9orf3-207ENST00000445181 NFKBIEO00221 500 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 DDX58O95786 925 aaKnown RBP30.72■■■□□ 2.51
C9orf3-207ENST00000445181 SLC4A2P04920 1241 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 PRELPP51888 382 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 SLFN5Q08AF3 891 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 TCIRG1Q13488 830 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 NMRK2Q9NPI5 230 aa30.72■■■□□ 2.51
C9orf3-207ENST00000445181 KLRG2A4D1S0 409 aaPredicted RBP30.71■■■□□ 2.51
C9orf3-207ENST00000445181 HNRNPUQ00839 825 aaKnown RBP eCLIP30.71■■■□□ 2.51
C9orf3-207ENST00000445181 SUSD4Q5VX71 490 aa30.71■■■□□ 2.51
C9orf3-207ENST00000445181 PRPF40BQ6NWY9 871 aaKnown RBP30.71■■■□□ 2.51
C9orf3-207ENST00000445181 PPP1R42Q7Z4L9 355 aa30.71■■■□□ 2.51
C9orf3-207ENST00000445181 CDCA7LQ96GN5 454 aa30.71■■■□□ 2.51
C9orf3-207ENST00000445181 NPR1P16066 1061 aa30.7■■■□□ 2.51
C9orf3-207ENST00000445181 NUTM1Q86Y26 1132 aa30.69■■■□□ 2.5
C9orf3-207ENST00000445181 UTP14AQ9BVJ6 771 aaKnown RBP30.68■■■□□ 2.5
C9orf3-207ENST00000445181 ANKRD36CQ5JPF3 1778 aa30.68■■■□□ 2.5
C9orf3-207ENST00000445181 KDM2BQ8NHM5 1336 aa30.68■■■□□ 2.5
C9orf3-207ENST00000445181 IBTKQ9P2D0 1353 aaPredicted RBP30.67■■■□□ 2.5
C9orf3-207ENST00000445181 ERFEQ4G0M1 354 aa30.67■■■□□ 2.5
C9orf3-207ENST00000445181 SLX4Q8IY92 1834 aa30.66■■■□□ 2.5
C9orf3-207ENST00000445181 NTSR2O95665 410 aa30.66■■■□□ 2.5
C9orf3-207ENST00000445181 NLRP10Q86W26 655 aa30.66■■■□□ 2.5
C9orf3-207ENST00000445181 ZC3H4Q9UPT8 1303 aaKnown RBP30.66■■■□□ 2.5
C9orf3-207ENST00000445181 ARFGEF2Q9Y6D5 1785 aa30.66■■■□□ 2.5
C9orf3-207ENST00000445181 ATP5J2-PTCD1G3V325 749 aa30.65■■■□□ 2.5
C9orf3-207ENST00000445181 SOGA3Q5TF21 947 aa30.65■■■□□ 2.5
C9orf3-207ENST00000445181 G2E3Q7L622 706 aa30.65■■■□□ 2.5
C9orf3-207ENST00000445181 TOMM70O94826 608 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 FLIIQ13045 1269 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 ZNF428Q96B54 188 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 MYD88Q99836 296 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 TRMT112Q9UI30 125 aaKnown RBP30.63■■■□□ 2.49
C9orf3-207ENST00000445181 MAP3K2Q9Y2U5 619 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 ABCC12Q96J65 1359 aa30.63■■■□□ 2.49
C9orf3-207ENST00000445181 PI4KAP2A4QPH2 592 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 KSR2Q6VAB6 950 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 PI4KAP1Q8N8J0 262 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 C7orf43Q8WVR3 580 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 ISCA1Q9BUE6 129 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 TAOK3Q9H2K8 898 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 RRAGCQ9HB90 399 aa30.62■■■□□ 2.49
C9orf3-207ENST00000445181 CACNA1SQ13698 1873 aa30.61■■■□□ 2.49
C9orf3-207ENST00000445181 CACNA1FO60840 1977 aa30.61■■■□□ 2.49
C9orf3-207ENST00000445181 ALDH1B1P30837 517 aa30.61■■■□□ 2.49
C9orf3-207ENST00000445181 FKBP5Q13451 457 aaPredicted RBP30.61■■■□□ 2.49
C9orf3-207ENST00000445181 LTBP3Q9NS15 1303 aa30.61■■■□□ 2.49
C9orf3-207ENST00000445181 FER1L6Q2WGJ9 1857 aa30.6■■■□□ 2.49
C9orf3-207ENST00000445181 CCDC88AQ3V6T2 1871 aa30.6■■■□□ 2.49
C9orf3-207ENST00000445181 RNF123Q5XPI4 1314 aa30.6■■■□□ 2.49
C9orf3-207ENST00000445181 TRMT2AQ8IZ69 625 aaKnown RBP30.6■■■□□ 2.49
C9orf3-207ENST00000445181 METTL22Q9BUU2 404 aaPredicted RBP30.6■■■□□ 2.49
C9orf3-207ENST00000445181 CRY2Q49AN0 593 aa30.59■■■□□ 2.49
C9orf3-207ENST00000445181 C16orf71Q8IYS4 520 aaPredicted RBP30.59■■■□□ 2.49
C9orf3-207ENST00000445181 GLTPD2A6NH11 291 aa30.58■■■□□ 2.49
C9orf3-207ENST00000445181 HSPA6P17066 643 aa30.58■■■□□ 2.49
C9orf3-207ENST00000445181 CCDC93Q567U6 631 aa30.58■■■□□ 2.49
C9orf3-207ENST00000445181 SH3TC1Q8TE82 1336 aa30.57■■■□□ 2.48
C9orf3-207ENST00000445181 NEXNQ0ZGT2 675 aa30.57■■■□□ 2.48
C9orf3-207ENST00000445181 TNRC6CQ9HCJ0 1690 aaKnown RBP30.57■■■□□ 2.48
C9orf3-207ENST00000445181 TRIM28Q13263 835 aaKnown RBP30.56■■■□□ 2.48
C9orf3-207ENST00000445181 RPGRQ92834 1020 aaKnown RBP30.56■■■□□ 2.48
C9orf3-207ENST00000445181 OLFM4Q6UX06 510 aa30.55■■■□□ 2.48
C9orf3-207ENST00000445181 NLRP3Q96P20 1036 aa30.55■■■□□ 2.48
C9orf3-207ENST00000445181 RIC1Q4ADV7 1423 aa30.55■■■□□ 2.48
C9orf3-207ENST00000445181 TIAM2Q8IVF5 1701 aa30.54■■■□□ 2.48
C9orf3-207ENST00000445181 SYNE4Q8N205 404 aa30.54■■■□□ 2.48
C9orf3-207ENST00000445181 CCDC191Q8NCU4 936 aa30.54■■■□□ 2.48
C9orf3-207ENST00000445181 FAM89AQ96GI7 184 aa30.54■■■□□ 2.48
C9orf3-207ENST00000445181 HCLS1P14317 486 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-207ENST00000445181 HOXA10P31260 410 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-207ENST00000445181 RTL5Q5HYW3 569 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-207ENST00000445181 SLC10A5Q5PT55 438 aa30.53■■■□□ 2.48
C9orf3-207ENST00000445181 DPY19L2Q6NUT2 758 aa30.53■■■□□ 2.48
C9orf3-207ENST00000445181 RBM46Q8TBY0 533 aaKnown RBP30.53■■■□□ 2.48
C9orf3-207ENST00000445181 CWC25Q9NXE8 425 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-207ENST00000445181 RTKN2Q8IZC4 609 aa30.52■■■□□ 2.48
C9orf3-207ENST00000445181 FKBP4Q02790 459 aaKnown RBP eCLIP30.51■■■□□ 2.47
C9orf3-207ENST00000445181 DNAAF4Q8WXU2 420 aa30.51■■■□□ 2.47
C9orf3-207ENST00000445181 CT47B1P0C2W7 299 aaPredicted RBP30.5■■■□□ 2.47
C9orf3-207ENST00000445181 VEGFAP15692 232 aaPredicted RBP30.5■■■□□ 2.47
C9orf3-207ENST00000445181 C3orf67Q6ZVT6 689 aa30.5■■■□□ 2.47
C9orf3-207ENST00000445181 RBM17Q96I25 401 aaKnown RBP30.5■■■□□ 2.47
C9orf3-207ENST00000445181 ZBTB38Q8NAP3 1195 aaPredicted RBP30.49■■■□□ 2.47
C9orf3-207ENST00000445181 SSH1Q8WYL5 1049 aa30.49■■■□□ 2.47
C9orf3-207ENST00000445181 CRAMP1Q96RY5 1269 aa30.49■■■□□ 2.47
C9orf3-207ENST00000445181 DICER1Q9UPY3 1922 aaKnown RBP30.49■■■□□ 2.47
C9orf3-207ENST00000445181 ZBED9Q6R2W3 1325 aa30.48■■■□□ 2.47
C9orf3-207ENST00000445181 IGKV5-2P06315 115 aa30.48■■■□□ 2.47
C9orf3-207ENST00000445181 MRPL50Q8N5N7 158 aaKnown RBP30.48■■■□□ 2.47
C9orf3-207ENST00000445181 BCL2L13Q9BXK5 485 aa30.48■■■□□ 2.47
C9orf3-207ENST00000445181 ZNF277Q9NRM2 450 aaPredicted RBP30.48■■■□□ 2.47
C9orf3-207ENST00000445181 CWF19L2Q2TBE0 894 aaKnown RBP30.47■■■□□ 2.47
C9orf3-207ENST00000445181 ALDH1L2Q3SY69 923 aa30.47■■■□□ 2.47
C9orf3-207ENST00000445181 SMC4Q9NTJ3 1288 aa30.47■■■□□ 2.47
C9orf3-207ENST00000445181 NEURL1BA8MQ27 555 aa30.46■■■□□ 2.47
C9orf3-207ENST00000445181 F6X3S4 739 aa30.46■■■□□ 2.47
C9orf3-207ENST00000445181 IRS4O14654 1257 aaPredicted RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms