RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
PDCD4-203ENST00000444997 SBF1O95248 1867 aa22.55■■□□□ 1.2
PDCD4-203ENST00000444997 HSPA6P17066 643 aa22.54■■□□□ 1.2
PDCD4-203ENST00000444997 TCIRG1Q13488 830 aa22.54■■□□□ 1.2
PDCD4-203ENST00000444997 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
PDCD4-203ENST00000444997 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
PDCD4-203ENST00000444997 RIC1Q4ADV7 1423 aa22.54■■□□□ 1.2
PDCD4-203ENST00000444997 RNF123Q5XPI4 1314 aa22.54■■□□□ 1.2
PDCD4-203ENST00000444997 SLX4Q8IY92 1834 aa22.53■■□□□ 1.2
PDCD4-203ENST00000444997 ANKRD13DQ6ZTN6 518 aa22.53■■□□□ 1.2
PDCD4-203ENST00000444997 PLBD2Q8NHP8 589 aa22.53■■□□□ 1.2
PDCD4-203ENST00000444997 HOXA10P31260 410 aaPredicted RBP22.52■■□□□ 1.2
PDCD4-203ENST00000444997 FKBP4Q02790 459 aaKnown RBP eCLIP22.52■■□□□ 1.2
PDCD4-203ENST00000444997 RBM46Q8TBY0 533 aaKnown RBP22.52■■□□□ 1.2
PDCD4-203ENST00000444997 ELL2O00472 640 aaPredicted RBP22.51■■□□□ 1.19
PDCD4-203ENST00000444997 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
PDCD4-203ENST00000444997 SLC10A5Q5PT55 438 aa22.51■■□□□ 1.19
PDCD4-203ENST00000444997 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
PDCD4-203ENST00000444997 NLRP10Q86W26 655 aa22.51■■□□□ 1.19
PDCD4-203ENST00000444997 TRMT112Q9UI30 125 aaKnown RBP22.51■■□□□ 1.19
PDCD4-203ENST00000444997 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
PDCD4-203ENST00000444997 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
PDCD4-203ENST00000444997 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
PDCD4-203ENST00000444997 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
PDCD4-203ENST00000444997 FER1L6Q2WGJ9 1857 aa22.49■■□□□ 1.19
PDCD4-203ENST00000444997 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
PDCD4-203ENST00000444997 OLFM4Q6UX06 510 aa22.48■■□□□ 1.19
PDCD4-203ENST00000444997 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
PDCD4-203ENST00000444997 TNRC6CQ9HCJ0 1690 aaKnown RBP22.48■■□□□ 1.19
PDCD4-203ENST00000444997 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 FSTL1Q12841 308 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
PDCD4-203ENST00000444997 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 WWC1Q8IX03 1113 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
PDCD4-203ENST00000444997 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
PDCD4-203ENST00000444997 PPEF1O14829 653 aaPredicted RBP22.46■■□□□ 1.19
PDCD4-203ENST00000444997 RIC3Q7Z5B4 369 aa22.46■■□□□ 1.19
PDCD4-203ENST00000444997 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
PDCD4-203ENST00000444997 TIAM2Q8IVF5 1701 aa22.45■■□□□ 1.19
PDCD4-203ENST00000444997 HCLS1P14317 486 aaPredicted RBP22.45■■□□□ 1.18
PDCD4-203ENST00000444997 APLP1P51693 650 aa22.45■■□□□ 1.18
PDCD4-203ENST00000444997 C3orf67Q6ZVT6 689 aa22.45■■□□□ 1.18
PDCD4-203ENST00000444997 PSMD1Q99460 953 aa22.45■■□□□ 1.18
PDCD4-203ENST00000444997 TCERG1O14776 1098 aaKnown RBP22.44■■□□□ 1.18
PDCD4-203ENST00000444997 IARSP41252 1262 aaKnown RBP22.44■■□□□ 1.18
PDCD4-203ENST00000444997 IL16Q14005 1332 aa22.44■■□□□ 1.18
PDCD4-203ENST00000444997 SMC1BQ8NDV3 1235 aa22.44■■□□□ 1.18
PDCD4-203ENST00000444997 TSR2Q969E8 191 aaKnown RBP22.44■■□□□ 1.18
PDCD4-203ENST00000444997 ISCA1Q9BUE6 129 aa22.44■■□□□ 1.18
PDCD4-203ENST00000444997 CCDC88AQ3V6T2 1871 aa22.43■■□□□ 1.18
PDCD4-203ENST00000444997 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
PDCD4-203ENST00000444997 DDX46Q7L014 1031 aaKnown RBP22.43■■□□□ 1.18
PDCD4-203ENST00000444997 PHAXQ9H814 394 aaKnown RBP22.43■■□□□ 1.18
PDCD4-203ENST00000444997 DDNO94850 711 aaPredicted RBP22.42■■□□□ 1.18
PDCD4-203ENST00000444997 DDX58O95786 925 aaKnown RBP22.42■■□□□ 1.18
PDCD4-203ENST00000444997 JDP2Q8WYK2 163 aa22.42■■□□□ 1.18
PDCD4-203ENST00000444997 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
PDCD4-203ENST00000444997 BBOX1O75936 387 aa22.41■■□□□ 1.18
PDCD4-203ENST00000444997 TRIM28Q13263 835 aaKnown RBP22.41■■□□□ 1.18
PDCD4-203ENST00000444997 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
PDCD4-203ENST00000444997 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
PDCD4-203ENST00000444997 ABCC4O15439 1325 aa22.4■■□□□ 1.18
PDCD4-203ENST00000444997 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
PDCD4-203ENST00000444997 FAM89AQ96GI7 184 aa22.4■■□□□ 1.18
PDCD4-203ENST00000444997 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
PDCD4-203ENST00000444997 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
PDCD4-203ENST00000444997 DICER1Q9UPY3 1922 aaKnown RBP22.39■■□□□ 1.18
PDCD4-203ENST00000444997 IQCA1LA6NCM1 817 aa22.39■■□□□ 1.17
PDCD4-203ENST00000444997 POTECB2RU33 542 aa22.39■■□□□ 1.17
PDCD4-203ENST00000444997 HSP90B1P14625 803 aaKnown RBP22.39■■□□□ 1.17
PDCD4-203ENST00000444997 TWISTNBQ3B726 338 aaPredicted RBP22.39■■□□□ 1.17
PDCD4-203ENST00000444997 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.17
PDCD4-203ENST00000444997 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
PDCD4-203ENST00000444997 MYD88Q99836 296 aa22.38■■□□□ 1.17
PDCD4-203ENST00000444997 GRAPQ13588 217 aa22.37■■□□□ 1.17
PDCD4-203ENST00000444997 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
PDCD4-203ENST00000444997 SP8Q8IXZ3 490 aa22.37■■□□□ 1.17
PDCD4-203ENST00000444997 LARGE2Q8N3Y3 721 aa22.37■■□□□ 1.17
PDCD4-203ENST00000444997 SUPT20HQ8NEM7 779 aa22.37■■□□□ 1.17
PDCD4-203ENST00000444997 GRAPLQ8TC17 118 aaPredicted RBP22.37■■□□□ 1.17
PDCD4-203ENST00000444997 WDR90Q96KV7 1748 aa22.37■■□□□ 1.17
PDCD4-203ENST00000444997 FZD9O00144 591 aa22.36■■□□□ 1.17
PDCD4-203ENST00000444997 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
PDCD4-203ENST00000444997 EIF6P56537 245 aaKnown RBP22.36■■□□□ 1.17
PDCD4-203ENST00000444997 TMC4Q7Z404 712 aa22.36■■□□□ 1.17
PDCD4-203ENST00000444997 CCDC191Q8NCU4 936 aa22.36■■□□□ 1.17
PDCD4-203ENST00000444997 L3MBTL3Q96JM7 780 aaPredicted RBP22.36■■□□□ 1.17
PDCD4-203ENST00000444997 SNED1Q8TER0 1413 aa22.36■■□□□ 1.17
PDCD4-203ENST00000444997 ZBTB38Q8NAP3 1195 aaPredicted RBP22.35■■□□□ 1.17
PDCD4-203ENST00000444997 METTL22Q9BUU2 404 aaPredicted RBP22.35■■□□□ 1.17
PDCD4-203ENST00000444997 VPS33BQ9H267 617 aa22.35■■□□□ 1.17
PDCD4-203ENST00000444997 ZNF541Q9H0D2 1346 aa22.34■■□□□ 1.17
PDCD4-203ENST00000444997 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
PDCD4-203ENST00000444997 DPP8Q6V1X1 898 aaPredicted RBP22.34■■□□□ 1.17
PDCD4-203ENST00000444997 MPNDQ8N594 471 aa22.34■■□□□ 1.17
PDCD4-203ENST00000444997 CWC25Q9NXE8 425 aaPredicted RBP22.34■■□□□ 1.17
PDCD4-203ENST00000444997 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
PDCD4-203ENST00000444997 SLC4A2P04920 1241 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms