RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 IFT57Q9NWB7 429 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
SF3A1-203ENST00000444440 RRAGCQ9HB90 399 aa14.17□□□□□ -0.14
SF3A1-203ENST00000444440 SCN4AP35499 1836 aa14.17□□□□□ -0.14
SF3A1-203ENST00000444440 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
SF3A1-203ENST00000444440 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-203ENST00000444440 HOXB7P09629 217 aa14.16□□□□□ -0.14
SF3A1-203ENST00000444440 GTF2E1P29083 439 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-203ENST00000444440 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
SF3A1-203ENST00000444440 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
SF3A1-203ENST00000444440 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
SF3A1-203ENST00000444440 GLTPD2A6NH11 291 aa14.15□□□□□ -0.14
SF3A1-203ENST00000444440 GNAI1P63096 354 aa14.15□□□□□ -0.14
SF3A1-203ENST00000444440 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
SF3A1-203ENST00000444440 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
SF3A1-203ENST00000444440 TSR2Q969E8 191 aaKnown RBP14.15□□□□□ -0.14
SF3A1-203ENST00000444440 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.15
SF3A1-203ENST00000444440 POTECB2RU33 542 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 TOMM70O94826 608 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 TCIRG1Q13488 830 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 CCDC93Q567U6 631 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 PHAXQ9H814 394 aaKnown RBP14.14□□□□□ -0.15
SF3A1-203ENST00000444440 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 PCNTO95613 3336 aa14.14□□□□□ -0.15
SF3A1-203ENST00000444440 ANP32CO43423 234 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 HSPA6P17066 643 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-203ENST00000444440 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 WWC1Q8IX03 1113 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 PLBD2Q8NHP8 589 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 UTP14AQ9BVJ6 771 aaKnown RBP14.13□□□□□ -0.15
SF3A1-203ENST00000444440 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-203ENST00000444440 DBF4Q9UBU7 674 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-203ENST00000444440 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
SF3A1-203ENST00000444440 ADAMTSL1Q8N6G6 1762 aa14.12□□□□□ -0.15
SF3A1-203ENST00000444440 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-203ENST00000444440 ALDH1B1P30837 517 aa14.12□□□□□ -0.15
SF3A1-203ENST00000444440 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
SF3A1-203ENST00000444440 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
SF3A1-203ENST00000444440 SOGA3Q5TF21 947 aa14.12□□□□□ -0.15
SF3A1-203ENST00000444440 ISCA1Q9BUE6 129 aa14.12□□□□□ -0.15
SF3A1-203ENST00000444440 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
SF3A1-203ENST00000444440 CCDC27Q2M243 656 aa14.11□□□□□ -0.15
SF3A1-203ENST00000444440 ANKRD13DQ6ZTN6 518 aa14.11□□□□□ -0.15
SF3A1-203ENST00000444440 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
SF3A1-203ENST00000444440 ABCC4O15439 1325 aa14.11□□□□□ -0.15
SF3A1-203ENST00000444440 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
SF3A1-203ENST00000444440 TCERG1O14776 1098 aaKnown RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 DDNO94850 711 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
SF3A1-203ENST00000444440 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 CRAMP1Q96RY5 1269 aa14.1□□□□□ -0.15
SF3A1-203ENST00000444440 HYPKQ9NX55 129 aa14.1□□□□□ -0.15
SF3A1-203ENST00000444440 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-203ENST00000444440 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-203ENST00000444440 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
SF3A1-203ENST00000444440 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
SF3A1-203ENST00000444440 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
SF3A1-203ENST00000444440 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
SF3A1-203ENST00000444440 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
SF3A1-203ENST00000444440 HTRA3P83110 453 aa14.08□□□□□ -0.16
SF3A1-203ENST00000444440 FAM89AQ96GI7 184 aa14.08□□□□□ -0.16
SF3A1-203ENST00000444440 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SF3A1-203ENST00000444440 SH3TC1Q8TE82 1336 aa14.08□□□□□ -0.16
SF3A1-203ENST00000444440 SCN9AQ15858 1988 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 A0A1B0GUL6 1792 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 VEGFAP15692 232 aaPredicted RBP14.07□□□□□ -0.16
SF3A1-203ENST00000444440 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
SF3A1-203ENST00000444440 PSMD1Q99460 953 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
SF3A1-203ENST00000444440 PSME4Q14997 1843 aa14.06□□□□□ -0.16
SF3A1-203ENST00000444440 G2E3Q7L622 706 aa14.06□□□□□ -0.16
SF3A1-203ENST00000444440 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-203ENST00000444440 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
SF3A1-203ENST00000444440 MYD88Q99836 296 aa14.06□□□□□ -0.16
SF3A1-203ENST00000444440 IL16Q14005 1332 aa14.06□□□□□ -0.16
SF3A1-203ENST00000444440 ZNF646O15015 1829 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-203ENST00000444440 FZD9O00144 591 aa14.05□□□□□ -0.16
SF3A1-203ENST00000444440 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-203ENST00000444440 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
SF3A1-203ENST00000444440 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
SF3A1-203ENST00000444440 RIC3Q7Z5B4 369 aa14.05□□□□□ -0.16
SF3A1-203ENST00000444440 JARID2Q92833 1246 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-203ENST00000444440 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
SF3A1-203ENST00000444440 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
SF3A1-203ENST00000444440 FSTL1Q12841 308 aa14.04□□□□□ -0.16
SF3A1-203ENST00000444440 TRIM28Q13263 835 aaKnown RBP14.04□□□□□ -0.16
SF3A1-203ENST00000444440 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
SF3A1-203ENST00000444440 TRPM7Q96QT4 1865 aa14.04□□□□□ -0.16
SF3A1-203ENST00000444440 POLR2AP24928 1970 aaKnown RBP14.03□□□□□ -0.16
SF3A1-203ENST00000444440 GRAPQ13588 217 aa14.03□□□□□ -0.16
SF3A1-203ENST00000444440 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
SF3A1-203ENST00000444440 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
SF3A1-203ENST00000444440 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms