RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 USP48Q86UV5 1035 aa19.83■□□□□ 0.77
SYNCRIP-203ENST00000444272 ZC3H15Q8WU90 426 aaKnown RBP19.83■□□□□ 0.77
SYNCRIP-203ENST00000444272 SLC10A3P09131 477 aa19.82■□□□□ 0.76
SYNCRIP-203ENST00000444272 GBA2Q9HCG7 927 aaPredicted RBP19.82■□□□□ 0.76
SYNCRIP-203ENST00000444272 HIRAP54198 1017 aaPredicted RBP19.81■□□□□ 0.76
SYNCRIP-203ENST00000444272 C2orf69Q8N8R5 385 aa19.81■□□□□ 0.76
SYNCRIP-203ENST00000444272 TBC1D8O95759 1140 aa19.8■□□□□ 0.76
SYNCRIP-203ENST00000444272 OTUD5Q96G74 571 aa19.8■□□□□ 0.76
SYNCRIP-203ENST00000444272 KLRG2A4D1S0 409 aaPredicted RBP19.79■□□□□ 0.76
SYNCRIP-203ENST00000444272 ALDH1B1P30837 517 aa19.79■□□□□ 0.76
SYNCRIP-203ENST00000444272 NBPF5PQ86XG9 351 aaPredicted RBP19.79■□□□□ 0.76
SYNCRIP-203ENST00000444272 NIM1KQ8IY84 436 aa19.79■□□□□ 0.76
SYNCRIP-203ENST00000444272 SLC52A2Q9HAB3 445 aa19.79■□□□□ 0.76
SYNCRIP-203ENST00000444272 GMPSP49915 693 aaPredicted RBP19.78■□□□□ 0.76
SYNCRIP-203ENST00000444272 TRPM4Q8TD43 1214 aa19.78■□□□□ 0.76
SYNCRIP-203ENST00000444272 INTS3Q68E01 1043 aaKnown RBP19.77■□□□□ 0.76
SYNCRIP-203ENST00000444272 CHRDL2Q6WN34 429 aa19.77■□□□□ 0.76
SYNCRIP-203ENST00000444272 REM2Q8IYK8 340 aaPredicted RBP19.77■□□□□ 0.76
SYNCRIP-203ENST00000444272 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
SYNCRIP-203ENST00000444272 KIAA0100Q14667 2235 aaKnown RBP19.76■□□□□ 0.75
SYNCRIP-203ENST00000444272 NPC1L1Q9UHC9 1359 aa19.76■□□□□ 0.75
SYNCRIP-203ENST00000444272 CAMTA2O94983 1202 aa19.76■□□□□ 0.75
SYNCRIP-203ENST00000444272 STARD3NLO95772 234 aa19.76■□□□□ 0.75
SYNCRIP-203ENST00000444272 H0YGN5 161 aa19.75■□□□□ 0.75
SYNCRIP-203ENST00000444272 EN2P19622 333 aaPredicted RBP19.75■□□□□ 0.75
SYNCRIP-203ENST00000444272 TESK2Q96S53 571 aa19.75■□□□□ 0.75
SYNCRIP-203ENST00000444272 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
SYNCRIP-203ENST00000444272 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
SYNCRIP-203ENST00000444272 GPR25O00155 361 aa19.74■□□□□ 0.75
SYNCRIP-203ENST00000444272 CXCL9Q07325 125 aa19.74■□□□□ 0.75
SYNCRIP-203ENST00000444272 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
SYNCRIP-203ENST00000444272 MRC1P22897 1456 aa19.73■□□□□ 0.75
SYNCRIP-203ENST00000444272 LAMA3Q16787 3333 aa19.73■□□□□ 0.75
SYNCRIP-203ENST00000444272 PPIP5K2O43314 1243 aa19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 RASAL3Q86YV0 1011 aa19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 BCL2L13Q9BXK5 485 aa19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 LGR6Q9HBX8 967 aa19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 POLR2AP24928 1970 aaKnown RBP19.72■□□□□ 0.75
SYNCRIP-203ENST00000444272 IL6STP40189 918 aaPredicted RBP19.71■□□□□ 0.75
SYNCRIP-203ENST00000444272 KRT26Q7Z3Y9 468 aa19.71■□□□□ 0.75
SYNCRIP-203ENST00000444272 AEBP1Q8IUX7 1158 aa19.71■□□□□ 0.75
SYNCRIP-203ENST00000444272 CDHR2Q9BYE9 1310 aa19.71■□□□□ 0.75
SYNCRIP-203ENST00000444272 VCANP13611 3396 aa19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 SHTN1A0MZ66 631 aa19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 ADM5C9JUS6 153 aa19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 AOC3Q16853 763 aa19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 COL25A1Q9BXS0 654 aaPredicted RBP19.7■□□□□ 0.74
SYNCRIP-203ENST00000444272 FKTNO75072 461 aa19.69■□□□□ 0.74
SYNCRIP-203ENST00000444272 NOM1Q5C9Z4 860 aaKnown RBP19.69■□□□□ 0.74
SYNCRIP-203ENST00000444272 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
SYNCRIP-203ENST00000444272 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
SYNCRIP-203ENST00000444272 SIN3AQ96ST3 1273 aa19.68■□□□□ 0.74
SYNCRIP-203ENST00000444272 DZIP3Q86Y13 1208 aaKnown RBP19.67■□□□□ 0.74
SYNCRIP-203ENST00000444272 CNOT7Q9UIV1 285 aaKnown RBP19.67■□□□□ 0.74
SYNCRIP-203ENST00000444272 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
SYNCRIP-203ENST00000444272 GRIPAP1Q4V328 841 aa19.66■□□□□ 0.74
SYNCRIP-203ENST00000444272 TRIM17Q9Y577 477 aa19.66■□□□□ 0.74
SYNCRIP-203ENST00000444272 TCERG1O14776 1098 aaKnown RBP19.65■□□□□ 0.74
SYNCRIP-203ENST00000444272 RNMTO43148 476 aaKnown RBP19.65■□□□□ 0.74
SYNCRIP-203ENST00000444272 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
SYNCRIP-203ENST00000444272 CARD14Q9BXL6 1004 aa19.65■□□□□ 0.74
SYNCRIP-203ENST00000444272 H7C1D1 291 aa19.64■□□□□ 0.73
SYNCRIP-203ENST00000444272 RAD17O75943 681 aa19.64■□□□□ 0.73
SYNCRIP-203ENST00000444272 MICALL2Q8IY33 904 aa19.64■□□□□ 0.73
SYNCRIP-203ENST00000444272 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
SYNCRIP-203ENST00000444272 A1BGP04217 495 aa19.63■□□□□ 0.73
SYNCRIP-203ENST00000444272 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
SYNCRIP-203ENST00000444272 SAMD7Q7Z3H4 446 aa19.63■□□□□ 0.73
SYNCRIP-203ENST00000444272 DCPSQ96C86 337 aaKnown RBP19.62■□□□□ 0.73
SYNCRIP-203ENST00000444272 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
SYNCRIP-203ENST00000444272 TNIP1Q15025 636 aa19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 CRY2Q49AN0 593 aa19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 OTOP1Q7RTM1 612 aa19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 SPTBN5Q9NRC6 3674 aaKnown RBP19.61■□□□□ 0.73
SYNCRIP-203ENST00000444272 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 GTF2E1P29083 439 aaPredicted RBP19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 ZNF652Q9Y2D9 606 aa19.6■□□□□ 0.73
SYNCRIP-203ENST00000444272 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 EGFRP00533 1210 aa19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 SULT6B1Q6IMI4 303 aa19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 RPGRQ92834 1020 aaKnown RBP19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 TMEM106CQ9BVX2 250 aa19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 TEX13AQ9BXU3 409 aaPredicted RBP19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 VPS33BQ9H267 617 aa19.59■□□□□ 0.73
SYNCRIP-203ENST00000444272 ABCC12Q96J65 1359 aa19.58■□□□□ 0.73
SYNCRIP-203ENST00000444272 TM4SF4P48230 202 aa19.58■□□□□ 0.72
SYNCRIP-203ENST00000444272 ARMC5Q96C12 935 aa19.58■□□□□ 0.72
SYNCRIP-203ENST00000444272 CDCA5Q96FF9 252 aa19.58■□□□□ 0.72
SYNCRIP-203ENST00000444272 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
SYNCRIP-203ENST00000444272 ZBTB12Q9Y330 459 aaPredicted RBP19.57■□□□□ 0.72
SYNCRIP-203ENST00000444272 SOX1O00570 391 aaPredicted RBP19.56■□□□□ 0.72
SYNCRIP-203ENST00000444272 RBM26Q5T8P6 1007 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms