RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 G3BP1Q13283 466 aaKnown RBP eCLIP17.98■□□□□ 0.47
LINC00299-202ENST00000442956 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
LINC00299-202ENST00000442956 FOXO4P98177 505 aa17.98■□□□□ 0.47
LINC00299-202ENST00000442956 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
LINC00299-202ENST00000442956 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
LINC00299-202ENST00000442956 SIL1Q9H173 461 aa17.98■□□□□ 0.47
LINC00299-202ENST00000442956 ERVV-1B6SEH8 477 aa17.97■□□□□ 0.47
LINC00299-202ENST00000442956 TBC1D32Q96NH3 1257 aa17.97■□□□□ 0.47
LINC00299-202ENST00000442956 GPTP24298 496 aa17.97■□□□□ 0.47
LINC00299-202ENST00000442956 RFX5P48382 616 aaPredicted RBP17.97■□□□□ 0.47
LINC00299-202ENST00000442956 CLASRPQ8N2M8 674 aaKnown RBP17.97■□□□□ 0.47
LINC00299-202ENST00000442956 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
LINC00299-202ENST00000442956 SASH1O94885 1247 aa17.95■□□□□ 0.46
LINC00299-202ENST00000442956 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
LINC00299-202ENST00000442956 AOX1Q06278 1338 aa17.95■□□□□ 0.46
LINC00299-202ENST00000442956 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
LINC00299-202ENST00000442956 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
LINC00299-202ENST00000442956 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
LINC00299-202ENST00000442956 CHMP3Q9Y3E7 222 aa17.95■□□□□ 0.46
LINC00299-202ENST00000442956 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
LINC00299-202ENST00000442956 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
LINC00299-202ENST00000442956 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
LINC00299-202ENST00000442956 KCNQ4P56696 695 aa17.94■□□□□ 0.46
LINC00299-202ENST00000442956 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
LINC00299-202ENST00000442956 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
LINC00299-202ENST00000442956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.92■□□□□ 0.46
LINC00299-202ENST00000442956 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
LINC00299-202ENST00000442956 AACSQ86V21 672 aa17.92■□□□□ 0.46
LINC00299-202ENST00000442956 PI4K2BQ8TCG2 481 aa17.92■□□□□ 0.46
LINC00299-202ENST00000442956 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
LINC00299-202ENST00000442956 CASC1Q6TDU7 716 aa17.91■□□□□ 0.46
LINC00299-202ENST00000442956 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
LINC00299-202ENST00000442956 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 ZNF34Q8IZ26 560 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 EAF2Q96CJ1 260 aaPredicted RBP17.9■□□□□ 0.46
LINC00299-202ENST00000442956 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 RREB1Q92766 1687 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 PLA2G12BQ9BX93 195 aa17.9■□□□□ 0.46
LINC00299-202ENST00000442956 TRMT112Q9UI30 125 aaKnown RBP17.9■□□□□ 0.46
LINC00299-202ENST00000442956 CDHR2Q9BYE9 1310 aa17.89■□□□□ 0.46
LINC00299-202ENST00000442956 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.46
LINC00299-202ENST00000442956 RILPL2Q969X0 211 aa17.89■□□□□ 0.46
LINC00299-202ENST00000442956 GPATCH3Q96I76 525 aa17.89■□□□□ 0.46
LINC00299-202ENST00000442956 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
LINC00299-202ENST00000442956 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
LINC00299-202ENST00000442956 ECHDC1Q9NTX5 307 aa17.89■□□□□ 0.45
LINC00299-202ENST00000442956 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
LINC00299-202ENST00000442956 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
LINC00299-202ENST00000442956 CCDC8Q9H0W5 538 aaPredicted RBP17.88■□□□□ 0.45
LINC00299-202ENST00000442956 BTAF1O14981 1849 aa17.88■□□□□ 0.45
LINC00299-202ENST00000442956 TFCP2Q12800 502 aa17.88■□□□□ 0.45
LINC00299-202ENST00000442956 ERC2O15083 957 aa17.87■□□□□ 0.45
LINC00299-202ENST00000442956 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 CCDC57Q2TAC2 916 aa17.87■□□□□ 0.45
LINC00299-202ENST00000442956 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 CSF1RP07333 972 aa17.87■□□□□ 0.45
LINC00299-202ENST00000442956 RBM25P49756 843 aaKnown RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 TLR7Q9NYK1 1049 aaKnown RBP17.87■□□□□ 0.45
LINC00299-202ENST00000442956 EP400Q96L91 3159 aa17.86■□□□□ 0.45
LINC00299-202ENST00000442956 MAP4K4O95819 1239 aaPredicted RBP17.86■□□□□ 0.45
LINC00299-202ENST00000442956 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
LINC00299-202ENST00000442956 ATG9AQ7Z3C6 839 aa17.86■□□□□ 0.45
LINC00299-202ENST00000442956 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
LINC00299-202ENST00000442956 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
LINC00299-202ENST00000442956 TNNI3KQ59H18 835 aa17.85■□□□□ 0.45
LINC00299-202ENST00000442956 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
LINC00299-202ENST00000442956 FPGT-TNNI3KV9GXZ4 949 aa17.85■□□□□ 0.45
LINC00299-202ENST00000442956 NUP98P52948 1817 aa17.85■□□□□ 0.45
LINC00299-202ENST00000442956 EYA2O00167 538 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 IL15P40933 162 aaPredicted RBP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 CTSWP56202 376 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 PARP10Q53GL7 1025 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 ANKRD36CQ5JPF3 1778 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 CHMLP26374 656 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 LRRC24Q50LG9 513 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 ZNF772Q68DY9 489 aaPredicted RBP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 FAM196AQ6ZSG2 479 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
LINC00299-202ENST00000442956 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
LINC00299-202ENST00000442956 GNPATO15228 680 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 RPS6KA4O75676 772 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 CIAO1O76071 339 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 SLC4A3P48751 1232 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 SMIM5Q71RC9 77 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 CNTROBQ8N137 903 aa17.83■□□□□ 0.45
LINC00299-202ENST00000442956 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
LINC00299-202ENST00000442956 PDE8AO60658 829 aa17.83■□□□□ 0.44
LINC00299-202ENST00000442956 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms