RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 BIRC2Q13490 618 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 ZKSCAN8Q15776 578 aaPredicted RBP11.83□□□□□ -0.52
LIN54-202ENST00000442461 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 FEZ2Q9UHY8 353 aaPredicted RBP11.83□□□□□ -0.52
LIN54-202ENST00000442461 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
LIN54-202ENST00000442461 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 SLC8A1P32418 973 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 GEMIN8Q9NWZ8 242 aaKnown RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 VAV2P52735 878 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 ETF1P62495 437 aaKnown RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 CFAP58Q5T655 872 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 RABEP2Q9H5N1 569 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
LIN54-202ENST00000442461 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
LIN54-202ENST00000442461 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
LIN54-202ENST00000442461 BAIAP2L1Q9UHR4 511 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 BRD1O95696 1058 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 PPFIA1Q13136 1202 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 BCAS4Q8TDM0 211 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 KIF1BPQ96EK5 621 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 FBXO38Q6PIJ6 1188 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
LIN54-202ENST00000442461 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
LIN54-202ENST00000442461 DNA2P51530 1060 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 MIPOL1Q8TD10 442 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 ERCC3P19447 782 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 C6orf163Q5TEZ5 329 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 FAM71BQ8TC56 605 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 TRIM6Q9C030 488 aaPredicted RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 LUC7L2Q9Y383 392 aaKnown RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 SEPT6Q14141 434 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 NECAB1Q8N987 351 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 N4BP2L2Q92802 583 aaPredicted RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 IGF1RP08069 1367 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 GOLGA6BA6NDN3 693 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
LIN54-202ENST00000442461 ZFYVE27Q5T4F4 411 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 TBC1D31Q96DN5 1066 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 CXorf56Q9H5V9 222 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
LIN54-202ENST00000442461 CFTRP13569 1480 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 ZFYP08048 801 aaPredicted RBP11.79□□□□□ -0.52
LIN54-202ENST00000442461 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
LIN54-202ENST00000442461 VCXQ9H320 206 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 N4BP3O15049 544 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 IFT74Q96LB3 600 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 SAMD15Q9P1V8 674 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
LIN54-202ENST00000442461 CCDC160A6NGH7 325 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 FCHSD2O94868 740 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 PPP1R12CQ9BZL4 782 aa11.79□□□□□ -0.52
LIN54-202ENST00000442461 CYLC1P35663 651 aaPredicted RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 CCT5P48643 541 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 ATP11AP98196 1134 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 FKBP15Q5T1M5 1219 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 PPFIBP2Q8ND30 876 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 LTV1Q96GA3 475 aaPredicted RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 NUCKS1Q9H1E3 243 aaKnown RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 RPGRIP1LQ68CZ1 1315 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 SYKP43405 635 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 SATB1Q01826 763 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 TADA2BQ86TJ2 420 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 AACSQ86V21 672 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 PDE11AQ9HCR9 933 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 EIF3CLB5ME19 914 aaKnown RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 CLCN6P51797 869 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 DAAM2Q86T65 1068 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 EIF3CQ99613 913 aaKnown RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 CLSTN2Q9H4D0 955 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms