RNA–Protein interactions for RNA: ENST00000442328.1

SYNJ2-IT1-201, SYNJ2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SYNJ2-IT1, Length 599 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-IT1-201ENST00000442328 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 TJP1Q07157 1748 aa9.48□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 BTAF1O14981 1849 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 CRKLP46109 303 aaKnown RBP9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 BEND3Q5T5X7 828 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 PLBD2Q8NHP8 589 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
SYNJ2-IT1-201ENST00000442328 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 LINS1Q8NG48 757 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 MEIS3Q99687 375 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 MYD88Q99836 296 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 METTL22Q9BUU2 404 aaPredicted RBP9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 SLC34A2O95436 690 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 IGHDP01880 384 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 USP44Q9H0E7 712 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ATP10DQ9P241 1426 aa9.45□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 IGKV5-2P06315 115 aa9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GNAI3P08754 354 aa9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 EVX2Q03828 476 aa9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RWDD1Q9H446 243 aaPredicted RBP9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ZNF831Q5JPB2 1677 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CNTNAP4Q9C0A0 1308 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 NEURL1BA8MQ27 555 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 APBA3O96018 575 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GNAI2P04899 355 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 UBTFL1P0CB47 393 aaPredicted RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CENPQQ7L2Z9 268 aaPredicted RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 TCIRG1Q13488 830 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GCKRQ14397 625 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 HLFQ16534 295 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 TXNRD1Q16881 649 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 LY75O60449 1722 aa9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 A0A087WZG4 1122 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GRM8O00222 908 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 PLSCR1O15162 318 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GNPATO15228 680 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 PDE4AP27815 886 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 C1QTNF8P60827 252 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 HDAC1Q13547 482 aaPredicted RBP9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CEP85Q6P2H3 762 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ANKRD44Q8N8A2 993 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ISCA1Q9BUE6 129 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RREB1Q92766 1687 aa9.41□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 COL15A1P39059 1388 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 NUP188Q5SRE5 1749 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 UTYO14607 1347 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 GPTP24298 496 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 HSP90AB3PQ58FF7 597 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 JARID2Q92833 1246 aaPredicted RBP9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 AK7Q96M32 723 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 HDAC5Q9UQL6 1122 aa9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.9
SYNJ2-IT1-201ENST00000442328 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 ATP8B2P98198 1209 aa9.39□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 TRIM28Q13263 835 aaKnown RBP9.39□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 CCDC191Q8NCU4 936 aa9.39□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 IBTKQ9P2D0 1353 aaPredicted RBP9.38□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 H7C1W4 665 aa9.38□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 HMMRO75330 724 aa9.38□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 PHF14O94880 888 aa9.38□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
SYNJ2-IT1-201ENST00000442328 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms