RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 SPINK5Q9NQ38 1064 aaPredicted RBP29.49■■■□□ 2.31
CRAT-204ENST00000441796 C21orf2O43822 256 aa29.48■■■□□ 2.31
CRAT-204ENST00000441796 STK31Q9BXU1 1019 aa29.48■■■□□ 2.31
CRAT-204ENST00000441796 ALDH1B1P30837 517 aa29.47■■■□□ 2.31
CRAT-204ENST00000441796 TRIM28Q13263 835 aaKnown RBP29.47■■■□□ 2.31
CRAT-204ENST00000441796 C9orf131Q5VYM1 1079 aa29.47■■■□□ 2.31
CRAT-204ENST00000441796 RIC3Q7Z5B4 369 aa29.47■■■□□ 2.31
CRAT-204ENST00000441796 SOGA3Q5TF21 947 aa29.46■■■□□ 2.31
CRAT-204ENST00000441796 VAMP4O75379 141 aa29.45■■■□□ 2.31
CRAT-204ENST00000441796 DDX58O95786 925 aaKnown RBP29.45■■■□□ 2.31
CRAT-204ENST00000441796 HOXA10P31260 410 aaPredicted RBP29.45■■■□□ 2.31
CRAT-204ENST00000441796 EXOSC9Q06265 439 aaKnown RBP29.45■■■□□ 2.31
CRAT-204ENST00000441796 DIEXFQ68CQ4 756 aaKnown RBP29.45■■■□□ 2.31
CRAT-204ENST00000441796 C7orf43Q8WVR3 580 aa29.45■■■□□ 2.31
CRAT-204ENST00000441796 NLRP3Q96P20 1036 aa29.45■■■□□ 2.31
CRAT-204ENST00000441796 TRMT112Q9UI30 125 aaKnown RBP29.45■■■□□ 2.31
CRAT-204ENST00000441796 NFKBIEO00221 500 aa29.44■■■□□ 2.3
CRAT-204ENST00000441796 SH3TC1Q8TE82 1336 aa29.44■■■□□ 2.3
CRAT-204ENST00000441796 RASSF7Q02833 373 aa29.43■■■□□ 2.3
CRAT-204ENST00000441796 ZNF219Q9P2Y4 722 aaPredicted RBP29.43■■■□□ 2.3
CRAT-204ENST00000441796 ATP5J2-PTCD1G3V325 749 aa29.42■■■□□ 2.3
CRAT-204ENST00000441796 RPGRQ92834 1020 aaKnown RBP29.42■■■□□ 2.3
CRAT-204ENST00000441796 RNF181Q9P0P0 153 aa29.42■■■□□ 2.3
CRAT-204ENST00000441796 SLC4A2P04920 1241 aa29.41■■■□□ 2.3
CRAT-204ENST00000441796 LMNB1P20700 586 aa29.41■■■□□ 2.3
CRAT-204ENST00000441796 LTBP3Q9NS15 1303 aa29.41■■■□□ 2.3
CRAT-204ENST00000441796 TCERG1O14776 1098 aaKnown RBP29.4■■■□□ 2.3
CRAT-204ENST00000441796 C3orf67Q6ZVT6 689 aa29.4■■■□□ 2.3
CRAT-204ENST00000441796 CRAMP1Q96RY5 1269 aa29.4■■■□□ 2.3
CRAT-204ENST00000441796 TNRC6CQ9HCJ0 1690 aaKnown RBP29.4■■■□□ 2.3
CRAT-204ENST00000441796 KSR2Q6VAB6 950 aa29.39■■■□□ 2.3
CRAT-204ENST00000441796 RBM17Q96I25 401 aaKnown RBP29.39■■■□□ 2.3
CRAT-204ENST00000441796 METTL22Q9BUU2 404 aaPredicted RBP29.39■■■□□ 2.3
CRAT-204ENST00000441796 GPBP1L1Q9HC44 474 aaPredicted RBP29.39■■■□□ 2.3
CRAT-204ENST00000441796 ANKRD36CQ5JPF3 1778 aa29.39■■■□□ 2.29
CRAT-204ENST00000441796 PRELPP51888 382 aa29.38■■■□□ 2.29
CRAT-204ENST00000441796 CCDC93Q567U6 631 aa29.38■■■□□ 2.29
CRAT-204ENST00000441796 SYNE4Q8N205 404 aa29.38■■■□□ 2.29
CRAT-204ENST00000441796 SLX4Q8IY92 1834 aa29.37■■■□□ 2.29
CRAT-204ENST00000441796 HCLS1P14317 486 aaPredicted RBP29.37■■■□□ 2.29
CRAT-204ENST00000441796 MYD88Q99836 296 aa29.37■■■□□ 2.29
CRAT-204ENST00000441796 TAOK3Q9H2K8 898 aa29.37■■■□□ 2.29
CRAT-204ENST00000441796 ZC3H4Q9UPT8 1303 aaKnown RBP29.37■■■□□ 2.29
CRAT-204ENST00000441796 G2E3Q7L622 706 aa29.36■■■□□ 2.29
CRAT-204ENST00000441796 CCDC191Q8NCU4 936 aa29.36■■■□□ 2.29
CRAT-204ENST00000441796 FAM89AQ96GI7 184 aa29.36■■■□□ 2.29
CRAT-204ENST00000441796 MAP3K2Q9Y2U5 619 aa29.36■■■□□ 2.29
CRAT-204ENST00000441796 PI4KAP2A4QPH2 592 aa29.35■■■□□ 2.29
CRAT-204ENST00000441796 E9PSI1 815 aa29.35■■■□□ 2.29
CRAT-204ENST00000441796 PI4KAP1Q8N8J0 262 aa29.35■■■□□ 2.29
CRAT-204ENST00000441796 ZNF526Q8TF50 670 aaPredicted RBP29.35■■■□□ 2.29
CRAT-204ENST00000441796 ARFGEF2Q9Y6D5 1785 aa29.34■■■□□ 2.29
CRAT-204ENST00000441796 CC2D2BQ6DHV5 1058 aa29.34■■■□□ 2.29
CRAT-204ENST00000441796 RTKN2Q8IZC4 609 aa29.34■■■□□ 2.29
CRAT-204ENST00000441796 MIER1Q8N108 512 aa29.34■■■□□ 2.29
CRAT-204ENST00000441796 FLIIQ13045 1269 aa29.33■■■□□ 2.29
CRAT-204ENST00000441796 ZBTB38Q8NAP3 1195 aaPredicted RBP29.33■■■□□ 2.29
CRAT-204ENST00000441796 ZNF428Q96B54 188 aa29.32■■■□□ 2.28
CRAT-204ENST00000441796 FKBP4Q02790 459 aaKnown RBP eCLIP29.31■■■□□ 2.28
CRAT-204ENST00000441796 GRIPAP1Q4V328 841 aa29.31■■■□□ 2.28
CRAT-204ENST00000441796 CWC25Q9NXE8 425 aaPredicted RBP29.31■■■□□ 2.28
CRAT-204ENST00000441796 SLFN5Q08AF3 891 aa29.3■■■□□ 2.28
CRAT-204ENST00000441796 NEXNQ0ZGT2 675 aa29.3■■■□□ 2.28
CRAT-204ENST00000441796 SF3B3Q15393 1217 aaKnown RBP29.3■■■□□ 2.28
CRAT-204ENST00000441796 OLFM4Q6UX06 510 aa29.3■■■□□ 2.28
CRAT-204ENST00000441796 IRS4O14654 1257 aaPredicted RBP29.29■■■□□ 2.28
CRAT-204ENST00000441796 PCCAP05165 728 aaPredicted RBP29.29■■■□□ 2.28
CRAT-204ENST00000441796 IGKV5-2P06315 115 aa29.29■■■□□ 2.28
CRAT-204ENST00000441796 HSP90B1P14625 803 aaKnown RBP29.29■■■□□ 2.28
CRAT-204ENST00000441796 DDX46Q7L014 1031 aaKnown RBP29.29■■■□□ 2.28
CRAT-204ENST00000441796 SNED1Q8TER0 1413 aa29.28■■■□□ 2.28
CRAT-204ENST00000441796 ABCC4O15439 1325 aa29.28■■■□□ 2.28
CRAT-204ENST00000441796 PPEF1O14829 653 aaPredicted RBP29.28■■■□□ 2.28
CRAT-204ENST00000441796 BBOX1O75936 387 aa29.28■■■□□ 2.28
CRAT-204ENST00000441796 FER1L6Q2WGJ9 1857 aa29.27■■■□□ 2.28
CRAT-204ENST00000441796 FKBP5Q13451 457 aaPredicted RBP29.27■■■□□ 2.28
CRAT-204ENST00000441796 RTL5Q5HYW3 569 aaPredicted RBP29.27■■■□□ 2.28
CRAT-204ENST00000441796 PSMD1Q99460 953 aa29.27■■■□□ 2.28
CRAT-204ENST00000441796 SBF1O95248 1867 aa29.27■■■□□ 2.28
CRAT-204ENST00000441796 KDM2BQ8NHM5 1336 aa29.26■■■□□ 2.27
CRAT-204ENST00000441796 GRAPQ13588 217 aa29.25■■■□□ 2.27
CRAT-204ENST00000441796 GRAPLQ8TC17 118 aaPredicted RBP29.25■■■□□ 2.27
CRAT-204ENST00000441796 DNAAF4Q8WXU2 420 aa29.25■■■□□ 2.27
CRAT-204ENST00000441796 ATP6V0A2Q9Y487 856 aa29.25■■■□□ 2.27
CRAT-204ENST00000441796 NEURL1BA8MQ27 555 aa29.24■■■□□ 2.27
CRAT-204ENST00000441796 KIF3CO14782 793 aa29.24■■■□□ 2.27
CRAT-204ENST00000441796 TRMT2AQ8IZ69 625 aaKnown RBP29.24■■■□□ 2.27
CRAT-204ENST00000441796 TMX4Q9H1E5 349 aaPredicted RBP29.24■■■□□ 2.27
CRAT-204ENST00000441796 GLTPD2A6NH11 291 aa29.23■■■□□ 2.27
CRAT-204ENST00000441796 C1QTNF8P60827 252 aa29.23■■■□□ 2.27
CRAT-204ENST00000441796 CDCA7LQ96GN5 454 aa29.23■■■□□ 2.27
CRAT-204ENST00000441796 CDHR2Q9BYE9 1310 aa29.22■■■□□ 2.27
CRAT-204ENST00000441796 PDE8AO60658 829 aa29.22■■■□□ 2.27
CRAT-204ENST00000441796 TMC4Q7Z404 712 aa29.22■■■□□ 2.27
CRAT-204ENST00000441796 SP8Q8IXZ3 490 aa29.22■■■□□ 2.27
CRAT-204ENST00000441796 ZNF277Q9NRM2 450 aaPredicted RBP29.22■■■□□ 2.27
CRAT-204ENST00000441796 CACNA1SQ13698 1873 aa29.22■■■□□ 2.27
CRAT-204ENST00000441796 CWF19L2Q2TBE0 894 aaKnown RBP29.21■■■□□ 2.27
CRAT-204ENST00000441796 NMRK2Q9NPI5 230 aa29.21■■■□□ 2.27
CRAT-204ENST00000441796 DPY19L2Q6NUT2 758 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms