RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
BRPF3-204ENST00000441730 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
BRPF3-204ENST00000441730 MRVI1Q9Y6F6 885 aa12.57□□□□□ -0.4
BRPF3-204ENST00000441730 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
BRPF3-204ENST00000441730 GIGYF1O75420 1035 aaPredicted RBP12.56□□□□□ -0.4
BRPF3-204ENST00000441730 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
BRPF3-204ENST00000441730 APBB1O00213 710 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 MS4A1P11836 297 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 CAPN2P17655 700 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 GPTP24298 496 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 EXOC6Q8TAG9 804 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 TNNT3P45378 269 aaPredicted RBP12.55□□□□□ -0.4
BRPF3-204ENST00000441730 ARMCX6Q7L4S7 300 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 STARD3NLO95772 234 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
BRPF3-204ENST00000441730 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
BRPF3-204ENST00000441730 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
BRPF3-204ENST00000441730 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 GNPATO15228 680 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
BRPF3-204ENST00000441730 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
BRPF3-204ENST00000441730 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
BRPF3-204ENST00000441730 IL16Q14005 1332 aa12.53□□□□□ -0.4
BRPF3-204ENST00000441730 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
BRPF3-204ENST00000441730 FLIIQ13045 1269 aa12.52□□□□□ -0.4
BRPF3-204ENST00000441730 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.4
BRPF3-204ENST00000441730 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.4
BRPF3-204ENST00000441730 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.41
BRPF3-204ENST00000441730 CTR9Q6PD62 1173 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
BRPF3-204ENST00000441730 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
BRPF3-204ENST00000441730 RLBP1P12271 317 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
BRPF3-204ENST00000441730 ITPK1Q13572 414 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
BRPF3-204ENST00000441730 CHMP3Q9Y3E7 222 aa12.52□□□□□ -0.41
BRPF3-204ENST00000441730 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
BRPF3-204ENST00000441730 AK7Q96M32 723 aa12.51□□□□□ -0.41
BRPF3-204ENST00000441730 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
BRPF3-204ENST00000441730 DBF4Q9UBU7 674 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-204ENST00000441730 COL18A1P39060 1754 aa12.51□□□□□ -0.41
BRPF3-204ENST00000441730 TRIM27P14373 513 aa12.51□□□□□ -0.41
BRPF3-204ENST00000441730 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-204ENST00000441730 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
BRPF3-204ENST00000441730 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
BRPF3-204ENST00000441730 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 MTA1Q13330 715 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 CEMIPQ8WUJ3 1361 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 TDO2P48775 406 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 CWF19L2Q2TBE0 894 aaKnown RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-204ENST00000441730 ITFG2Q969R8 447 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 MYD88Q99836 296 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 MAP3K2Q9Y2U5 619 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 ATRNO75882 1429 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
BRPF3-204ENST00000441730 TXNRD1Q16881 649 aa12.49□□□□□ -0.41
BRPF3-204ENST00000441730 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
BRPF3-204ENST00000441730 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
BRPF3-204ENST00000441730 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
BRPF3-204ENST00000441730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.419e-7■■■■■ 50.6
BRPF3-204ENST00000441730 NRDCO43847 1150 aa12.49□□□□□ -0.41
BRPF3-204ENST00000441730 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
BRPF3-204ENST00000441730 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
BRPF3-204ENST00000441730 MPHOSPH10O00566 681 aaKnown RBP12.48□□□□□ -0.41
BRPF3-204ENST00000441730 ANKRD23Q86SG2 305 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
BRPF3-204ENST00000441730 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
BRPF3-204ENST00000441730 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
BRPF3-204ENST00000441730 POLD1P28340 1107 aa12.47□□□□□ -0.41
BRPF3-204ENST00000441730 KIF6Q6ZMV9 814 aa12.47□□□□□ -0.41
BRPF3-204ENST00000441730 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
BRPF3-204ENST00000441730 DZIP3Q86Y13 1208 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms