RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 ANKRD18BA2A2Z9 1011 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 FAM177BA6PVY3 158 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 PPP4R3BQ5MIZ7 849 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 CCAR1Q8IX12 1150 aaKnown RBP5.43□□□□□ -1.54
SCN3A-204ENST00000440431 ANKRD20A12PQ8NF67 263 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 BCL11BQ9C0K0 894 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-204ENST00000440431 NYXQ9GZU5 481 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 PODXL2Q9NZ53 605 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 PXDNLA1KZ92 1463 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 CASZ1Q86V15 1759 aa5.43□□□□□ -1.54
SCN3A-204ENST00000440431 COL5A3P25940 1745 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-204ENST00000440431 SRGAP3O43295 1099 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 ALDH1L1O75891 902 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 GLRX3O76003 335 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 RFC4P35249 363 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 SPTY2D1Q68D10 685 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 DRC7Q8IY82 874 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 CCDC43Q96MW1 224 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 SMC3Q9UQE7 1217 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 BCL9LQ86UU0 1499 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 GOLGB1Q14789 3259 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 ZNF831Q5JPB2 1677 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 ADCY9O60503 1353 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 PCDH11XQ9BZA7 1347 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 PCDH11YQ9BZA8 1340 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 SLC5A1P13866 664 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 ST5P78524 1137 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 C8orf34Q49A92 452 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 IPO9Q96P70 1041 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 TRMT112Q9UI30 125 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 HOXB7P09629 217 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 TSR1Q2NL82 804 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 DDX46Q7L014 1031 aaKnown RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 CWC25Q9NXE8 425 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 SBF2Q86WG5 1849 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 TPM1P09493 284 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 POLD1P28340 1107 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 HDAC1Q13547 482 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 PROSER3Q2NL68 480 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 METTL24Q5JXM2 366 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 CEP89Q96ST8 783 aa5.42□□□□□ -1.54
SCN3A-204ENST00000440431 PPP1R1BQ9UD71 204 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-204ENST00000440431 TPM3P06753 285 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 RABEP1Q15276 862 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 C8orf37Q96NL8 207 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 GIGYF1O75420 1035 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-204ENST00000440431 TRAF1Q13077 416 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 TTF1Q15361 905 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-204ENST00000440431 TPD52L1Q16890 204 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-204ENST00000440431 SMC5Q8IY18 1101 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 FLAD1Q8NFF5 587 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 RAD21O60216 631 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 CDKL5O76039 1030 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 MAP3K12Q12852 859 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 TPRNQ4KMQ1 711 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 TRIM22Q8IYM9 498 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 ZGPATQ8N5A5 531 aaKnown RBP5.41□□□□□ -1.54
SCN3A-204ENST00000440431 PHAXQ9H814 394 aaKnown RBP5.41□□□□□ -1.54
SCN3A-204ENST00000440431 CHMP5Q9NZZ3 219 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
SCN3A-204ENST00000440431 UQCRFS1P1P0C7P4 283 aa5.4□□□□□ -1.54
SCN3A-204ENST00000440431 IKQ13123 557 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 CCDC152Q4G0S7 254 aa5.4□□□□□ -1.54
SCN3A-204ENST00000440431 ZSCAN31Q96LW9 406 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 DNAJC2Q99543 621 aaKnown RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 CARD10Q9BWT7 1032 aa5.4□□□□□ -1.54
SCN3A-204ENST00000440431 IBTKQ9P2D0 1353 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 MYH14Q7Z406 1995 aaKnown RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 AFDNP55196 1824 aaKnown RBP5.4□□□□□ -1.54
SCN3A-204ENST00000440431 FLIIQ13045 1269 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 MCTP1Q6DN14 999 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 ANKRD13DQ6ZTN6 518 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 JMYQ8N9B5 988 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 NLRP3Q96P20 1036 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 MYD88Q99836 296 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 C22orf23Q9BZE7 217 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 TPTE2Q6XPS3 522 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 AACSQ86V21 672 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 WASF1Q92558 559 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 SLC4A9Q96Q91 983 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 SETDB2Q96T68 719 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 RNF41Q9H4P4 317 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-204ENST00000440431 SLC52A2Q9HAB3 445 aa5.4□□□□□ -1.55
SCN3A-204ENST00000440431 RTCBQ9Y3I0 505 aaKnown RBP5.4□□□□□ -1.55
SCN3A-204ENST00000440431 COL4A1P02462 1669 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 SEC24BO95487 1268 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 MSNP26038 577 aaKnown RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 GSTO1P78417 241 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 PARP10Q53GL7 1025 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 CCDC178Q5BJE1 867 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 KAZALD1Q96I82 304 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 BACH2Q9BYV9 841 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 SLKQ9H2G2 1235 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 STK32BQ9NY57 414 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 RAI14Q9P0K7 980 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 PDZRN3Q9UPQ7 1066 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 F6X3S4 739 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 TXLNAP40222 546 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms