RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 ARAP2Q8WZ64 1704 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 VPS72Q15906 364 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 CHMLP26374 656 aa16.11■□□□□ 0.17
ACTN4-204ENST00000440400 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
ACTN4-204ENST00000440400 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
ACTN4-204ENST00000440400 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 APBB1O00213 710 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 ERC2O15083 957 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-204ENST00000440400 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-204ENST00000440400 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
ACTN4-204ENST00000440400 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-204ENST00000440400 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 STARD3NLO95772 234 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
ACTN4-204ENST00000440400 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 MAP3K15Q6ZN16 1313 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 RFX7Q2KHR2 1363 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 REC8O95072 547 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
ACTN4-204ENST00000440400 BTAF1O14981 1849 aa16.08■□□□□ 0.17
ACTN4-204ENST00000440400 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.17
ACTN4-204ENST00000440400 PANK2Q9BZ23 570 aa16.08■□□□□ 0.17
ACTN4-204ENST00000440400 DDB1Q16531 1140 aa16.08■□□□□ 0.16
ACTN4-204ENST00000440400 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
ACTN4-204ENST00000440400 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
ACTN4-204ENST00000440400 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.16
ACTN4-204ENST00000440400 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
ACTN4-204ENST00000440400 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
ACTN4-204ENST00000440400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-204ENST00000440400 A0A087WZG4 1122 aa16.07■□□□□ 0.16
ACTN4-204ENST00000440400 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
ACTN4-204ENST00000440400 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
ACTN4-204ENST00000440400 CLASRPQ8N2M8 674 aaKnown RBP16.07■□□□□ 0.16
ACTN4-204ENST00000440400 GPR108Q9NPR9 543 aa16.07■□□□□ 0.16
ACTN4-204ENST00000440400 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
ACTN4-204ENST00000440400 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-204ENST00000440400 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 SLKQ9H2G2 1235 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-204ENST00000440400 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 RGL2O15211 777 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 CIAO1O76071 339 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 PCCAP05165 728 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-204ENST00000440400 RABEP1Q15276 862 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 GIGYF2Q6Y7W6 1299 aaKnown RBP16.06■□□□□ 0.16
ACTN4-204ENST00000440400 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-204ENST00000440400 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
ACTN4-204ENST00000440400 ANAPC15P60006 121 aa16.05■□□□□ 0.16
ACTN4-204ENST00000440400 ZNF609O15014 1411 aa16.05■□□□□ 0.16
ACTN4-204ENST00000440400 A0A1B0GUL6 1792 aa16.05■□□□□ 0.16
ACTN4-204ENST00000440400 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
ACTN4-204ENST00000440400 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.165e-10■■□□□ 12.7
ACTN4-204ENST00000440400 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-204ENST00000440400 CSF1RP07333 972 aa16.04■□□□□ 0.16
ACTN4-204ENST00000440400 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
ACTN4-204ENST00000440400 ATRNO75882 1429 aa16.04■□□□□ 0.16
ACTN4-204ENST00000440400 INTS5Q6P9B9 1019 aaKnown RBP16.04■□□□□ 0.16
ACTN4-204ENST00000440400 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
ACTN4-204ENST00000440400 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 CLCN1P35523 988 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 ATG9AQ7Z3C6 839 aa16.03■□□□□ 0.16
ACTN4-204ENST00000440400 ZBTB38Q8NAP3 1195 aaPredicted RBP16.03■□□□□ 0.16
ACTN4-204ENST00000440400 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
ACTN4-204ENST00000440400 SGSM2O43147 1006 aa16.02■□□□□ 0.16
ACTN4-204ENST00000440400 EIF5P55010 431 aaKnown RBP16.02■□□□□ 0.16
ACTN4-204ENST00000440400 KCNB2Q92953 911 aa16.02■□□□□ 0.16
ACTN4-204ENST00000440400 PIP4K2BP78356 416 aa16.02■□□□□ 0.15
ACTN4-204ENST00000440400 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 TNNI3KQ59H18 835 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 AACSQ86V21 672 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 AK7Q96M32 723 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 FPGT-TNNI3KV9GXZ4 949 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 PALLDQ8WX93 1383 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 ATP5JP18859 108 aa16.01■□□□□ 0.15
ACTN4-204ENST00000440400 CD2BP2O95400 341 aaKnown RBP16■□□□□ 0.15
ACTN4-204ENST00000440400 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
ACTN4-204ENST00000440400 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
ACTN4-204ENST00000440400 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
ACTN4-204ENST00000440400 NLRP10Q86W26 655 aa16■□□□□ 0.15
ACTN4-204ENST00000440400 SMARCC1Q92922 1105 aaPredicted RBP16■□□□□ 0.15
ACTN4-204ENST00000440400 IL25Q9H293 177 aa16■□□□□ 0.15
ACTN4-204ENST00000440400 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
ACTN4-204ENST00000440400 RAD50Q92878 1312 aa16■□□□□ 0.15
ACTN4-204ENST00000440400 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
ACTN4-204ENST00000440400 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms