RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 SMIM5Q71RC9 77 aa14.22□□□□□ -0.13
SMPD4P2-201ENST00000440167 PA2G4Q9UQ80 394 aaKnown RBP14.22□□□□□ -0.13
SMPD4P2-201ENST00000440167 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
SMPD4P2-201ENST00000440167 CNTNAP4Q9C0A0 1308 aa14.21□□□□□ -0.13
SMPD4P2-201ENST00000440167 AK9Q5TCS8 1911 aa14.21□□□□□ -0.13
SMPD4P2-201ENST00000440167 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 TRIM37O94972 964 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 RXRBP28702 533 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 PLEKHM2Q8IWE5 1019 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 RGS17Q9UGC6 210 aaPredicted RBP14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 LAMB2P55268 1798 aa14.2□□□□□ -0.14
SMPD4P2-201ENST00000440167 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 KLHDC4Q8TBB5 520 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 TNS1Q9HBL0 1735 aaKnown RBP14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 FOXO4P98177 505 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 OS9Q13438 667 aaPredicted RBP14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 RHPN1Q8TCX5 695 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 IL1RAPL2Q9NP60 686 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 CHMP3Q9Y3E7 222 aa14.19□□□□□ -0.14
SMPD4P2-201ENST00000440167 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 PRKCSHP14314 528 aaPredicted RBP14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 LMBR1LQ6UX01 489 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 SIL1Q9H173 461 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 SPEF2Q9C093 1822 aa14.18□□□□□ -0.14
SMPD4P2-201ENST00000440167 GNPATO15228 680 aa14.17□□□□□ -0.14
SMPD4P2-201ENST00000440167 RFX5P48382 616 aaPredicted RBP14.17□□□□□ -0.14
SMPD4P2-201ENST00000440167 ZNF34Q8IZ26 560 aa14.17□□□□□ -0.14
SMPD4P2-201ENST00000440167 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
SMPD4P2-201ENST00000440167 LRRC4BQ9NT99 713 aa14.17□□□□□ -0.14
SMPD4P2-201ENST00000440167 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
SMPD4P2-201ENST00000440167 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
SMPD4P2-201ENST00000440167 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
SMPD4P2-201ENST00000440167 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
SMPD4P2-201ENST00000440167 SALL3Q9BXA9 1300 aa14.16□□□□□ -0.14
SMPD4P2-201ENST00000440167 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 TSHZ3Q63HK5 1081 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 EP400Q96L91 3159 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 CDHR2Q9BYE9 1310 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 BMP2KLQ5H9B9 411 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 TTC22Q5TAA0 569 aa14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
SMPD4P2-201ENST00000440167 SASH1O94885 1247 aa14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 SEC24BO95487 1268 aa14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 PDE1AP54750 535 aa14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 SUSD4Q5VX71 490 aa14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 NIP7Q9Y221 180 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.14□□□□□ -0.15
SMPD4P2-201ENST00000440167 MSH5O43196 834 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 PHF14O94880 888 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 MX1P20591 662 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 USPL1Q5W0Q7 1092 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 ERC1Q8IUD2 1116 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 AK7Q96M32 723 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 COPRSQ9NQ92 184 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 ZNF652Q9Y2D9 606 aa14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
SMPD4P2-201ENST00000440167 IRS4O14654 1257 aaPredicted RBP14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 ZNF594Q96JF6 807 aaPredicted RBP14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 OSBPL3Q9H4L5 887 aa14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 NARFQ9UHQ1 456 aa14.12□□□□□ -0.15
SMPD4P2-201ENST00000440167 TAF1P21675 1872 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 NTSR2O95665 410 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 PARP10Q53GL7 1025 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 SLC27A3Q5K4L6 730 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 CLEC4GQ6UXB4 293 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 BICDL1Q6ZP65 573 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 ARHGEF1Q92888 912 aaKnown RBP14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 UTP14AQ9BVJ6 771 aaKnown RBP14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 RGPD3A6NKT7 1758 aaPredicted RBP14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
SMPD4P2-201ENST00000440167 ZPR1O75312 459 aa14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 APBA3O96018 575 aa14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 CSF1RP07333 972 aa14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 HCLS1P14317 486 aaPredicted RBP14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 TFCP2Q12800 502 aa14.1□□□□□ -0.15
SMPD4P2-201ENST00000440167 TXNRD1Q16881 649 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms