RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
CPSF7-205ENST00000439958 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
CPSF7-205ENST00000439958 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
CPSF7-205ENST00000439958 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
CPSF7-205ENST00000439958 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
CPSF7-205ENST00000439958 QTRT2Q9H974 415 aaKnown RBP18.39■□□□□ 0.53
CPSF7-205ENST00000439958 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
CPSF7-205ENST00000439958 SPATA31A6Q5VVP1 1343 aa18.38■□□□□ 0.53
CPSF7-205ENST00000439958 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
CPSF7-205ENST00000439958 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
CPSF7-205ENST00000439958 ERC2O15083 957 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-205ENST00000439958 MTX1Q13505 466 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 ECHDC1Q9NTX5 307 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
CPSF7-205ENST00000439958 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-205ENST00000439958 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 SLIT2O94813 1529 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
CPSF7-205ENST00000439958 PTPN12Q05209 780 aaKnown RBP18.36■□□□□ 0.53
CPSF7-205ENST00000439958 REC8O95072 547 aa18.36■□□□□ 0.53
CPSF7-205ENST00000439958 LRRC24Q50LG9 513 aa18.36■□□□□ 0.53
CPSF7-205ENST00000439958 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-205ENST00000439958 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
CPSF7-205ENST00000439958 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
CPSF7-205ENST00000439958 H7C1W4 665 aa18.36■□□□□ 0.53
CPSF7-205ENST00000439958 TIMM10P62072 90 aa18.36■□□□□ 0.53
CPSF7-205ENST00000439958 PUS3Q9BZE2 481 aaKnown RBP18.36■□□□□ 0.53
CPSF7-205ENST00000439958 CCDC24Q8N4L8 307 aa18.35■□□□□ 0.53
CPSF7-205ENST00000439958 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
CPSF7-205ENST00000439958 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-205ENST00000439958 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
CPSF7-205ENST00000439958 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
CPSF7-205ENST00000439958 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-205ENST00000439958 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 UTYO14607 1347 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 GNPATO15228 680 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 IL6STP40189 918 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-205ENST00000439958 FSD1Q9BTV5 496 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-205ENST00000439958 LRP6O75581 1613 aa18.34■□□□□ 0.53
CPSF7-205ENST00000439958 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-205ENST00000439958 KCNJ4P48050 445 aa18.33■□□□□ 0.53
CPSF7-205ENST00000439958 FOXO4P98177 505 aa18.33■□□□□ 0.53
CPSF7-205ENST00000439958 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.53
CPSF7-205ENST00000439958 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.53
CPSF7-205ENST00000439958 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
CPSF7-205ENST00000439958 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
CPSF7-205ENST00000439958 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.52
CPSF7-205ENST00000439958 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
CPSF7-205ENST00000439958 CHMLP26374 656 aa18.32■□□□□ 0.52
CPSF7-205ENST00000439958 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
CPSF7-205ENST00000439958 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
CPSF7-205ENST00000439958 ZBTB38Q8NAP3 1195 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-205ENST00000439958 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 CASP7P55210 303 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-205ENST00000439958 GREM2Q9H772 168 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
CPSF7-205ENST00000439958 ITGA6P23229 1130 aa18.3■□□□□ 0.52
CPSF7-205ENST00000439958 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
CPSF7-205ENST00000439958 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
CPSF7-205ENST00000439958 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
CPSF7-205ENST00000439958 EIF5P55010 431 aaKnown RBP18.29■□□□□ 0.52
CPSF7-205ENST00000439958 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
CPSF7-205ENST00000439958 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
CPSF7-205ENST00000439958 PCCAP05165 728 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-205ENST00000439958 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
CPSF7-205ENST00000439958 TRIM37O94972 964 aa18.29■□□□□ 0.52
CPSF7-205ENST00000439958 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-205ENST00000439958 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
CPSF7-205ENST00000439958 ITGB4P16144 1822 aa18.29■□□□□ 0.52
CPSF7-205ENST00000439958 FKBP4Q02790 459 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPSF7-205ENST00000439958 RABL6Q3YEC7 729 aaPredicted RBP18.28■□□□□ 0.52
CPSF7-205ENST00000439958 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 MCCP23508 829 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 DOT1LQ8TEK3 1739 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 EYA2O00167 538 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 IL25Q9H293 177 aa18.28■□□□□ 0.52
CPSF7-205ENST00000439958 ZPR1O75312 459 aa18.27■□□□□ 0.52
CPSF7-205ENST00000439958 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.52
CPSF7-205ENST00000439958 UTP14AQ9BVJ6 771 aaKnown RBP18.27■□□□□ 0.52
CPSF7-205ENST00000439958 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
CPSF7-205ENST00000439958 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.51
CPSF7-205ENST00000439958 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms