RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
PCNX3-202ENST00000439247 USP54Q70EL1 1684 aa16.15■□□□□ 0.18
PCNX3-202ENST00000439247 TYRO3Q06418 890 aa16.14■□□□□ 0.18
PCNX3-202ENST00000439247 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.18
PCNX3-202ENST00000439247 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
PCNX3-202ENST00000439247 ANO6Q4KMQ2 910 aa16.14■□□□□ 0.17
PCNX3-202ENST00000439247 ZNF592Q92610 1267 aa16.14■□□□□ 0.17
PCNX3-202ENST00000439247 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
PCNX3-202ENST00000439247 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.14■□□□□ 0.176e-6■■■■■ 27.5
PCNX3-202ENST00000439247 V9GYY5 206 aaPredicted RBP16.14■□□□□ 0.17
PCNX3-202ENST00000439247 FLT4P35916 1363 aa16.14■□□□□ 0.17
PCNX3-202ENST00000439247 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
PCNX3-202ENST00000439247 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 DACT1Q9NYF0 836 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 ATP6V1DQ9Y5K8 247 aa16.13■□□□□ 0.17
PCNX3-202ENST00000439247 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
PCNX3-202ENST00000439247 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
PCNX3-202ENST00000439247 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 TNNT1P13805 278 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 ZNF771Q7L3S4 317 aaPredicted RBP16.12■□□□□ 0.17
PCNX3-202ENST00000439247 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 NUP62CLQ9H1M0 184 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 KIF20AO95235 890 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 SSH3Q8TE77 659 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 TPCN1Q9ULQ1 816 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 LTN1O94822 1766 aa16.12■□□□□ 0.17
PCNX3-202ENST00000439247 ZBTB22O15209 634 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 LARP1BQ659C4 914 aaKnown RBP16.11■□□□□ 0.17
PCNX3-202ENST00000439247 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
PCNX3-202ENST00000439247 A0A087WWV3 80 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 CACTINQ8WUQ7 758 aaKnown RBP16.1■□□□□ 0.17
PCNX3-202ENST00000439247 AXIN2Q9Y2T1 843 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 USP27XA6NNY8 438 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 EYA1Q99502 592 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 TNMDQ9H2S6 317 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 SLIT3O75094 1523 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 ANXA1P04083 346 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 DNAJC25Q9H1X3 360 aa16.1■□□□□ 0.17
PCNX3-202ENST00000439247 CGNQ9P2M7 1197 aaKnown RBP16.1■□□□□ 0.17
PCNX3-202ENST00000439247 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
PCNX3-202ENST00000439247 STK3Q13188 491 aa16.09■□□□□ 0.17
PCNX3-202ENST00000439247 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
PCNX3-202ENST00000439247 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
PCNX3-202ENST00000439247 NR1I2O75469 434 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 ZNF75DP51815 510 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
PCNX3-202ENST00000439247 CYP46A1Q9Y6A2 500 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 AOX1Q06278 1338 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 TPM3P06753 285 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 KRT85P78386 507 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 IP6K1Q92551 441 aa16.08■□□□□ 0.16
PCNX3-202ENST00000439247 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
PCNX3-202ENST00000439247 OS9Q13438 667 aaPredicted RBP16.07■□□□□ 0.16
PCNX3-202ENST00000439247 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 OGFRQ9NZT2 677 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 RGPD1P0DJD0 1748 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
PCNX3-202ENST00000439247 SMTNL1A8MU46 457 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 NPHP1O15259 732 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
PCNX3-202ENST00000439247 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 PA2G4Q9UQ80 394 aaKnown RBP16.06■□□□□ 0.16
PCNX3-202ENST00000439247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.06■□□□□ 0.16
PCNX3-202ENST00000439247 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 POLA2Q14181 598 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
PCNX3-202ENST00000439247 KCNJ4P48050 445 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 CCDC112Q8NEF3 446 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 GOLGA6L4A6NEF3 574 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 ZNF165P49910 485 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 PIP4K2BP78356 416 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
PCNX3-202ENST00000439247 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 ROBO1Q9Y6N7 1651 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms