RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
SMPD4-208ENST00000439029 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
SMPD4-208ENST00000439029 PRAMEF22A3QJZ6 481 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 GMPSP49915 693 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-208ENST00000439029 TEFQ10587 303 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 NIM1KQ8IY84 436 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 HHIPL1Q96JK4 782 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 RNF186Q9NXI6 227 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
SMPD4-208ENST00000439029 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 HIRAP54198 1017 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-208ENST00000439029 KIF23Q02241 960 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-208ENST00000439029 AOC3Q16853 763 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 USP48Q86UV5 1035 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
SMPD4-208ENST00000439029 HLFQ16534 295 aa13.24□□□□□ -0.29
SMPD4-208ENST00000439029 CTU1Q7Z7A3 348 aaKnown RBP13.24□□□□□ -0.29
SMPD4-208ENST00000439029 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
SMPD4-208ENST00000439029 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
SMPD4-208ENST00000439029 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
SMPD4-208ENST00000439029 ABCC12Q96J65 1359 aa13.23□□□□□ -0.29
SMPD4-208ENST00000439029 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
SMPD4-208ENST00000439029 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-208ENST00000439029 CXCL9Q07325 125 aa13.23□□□□□ -0.29
SMPD4-208ENST00000439029 HABP4Q5JVS0 413 aaKnown RBP13.23□□□□□ -0.29
SMPD4-208ENST00000439029 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
SMPD4-208ENST00000439029 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
SMPD4-208ENST00000439029 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
SMPD4-208ENST00000439029 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
SMPD4-208ENST00000439029 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
SMPD4-208ENST00000439029 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
SMPD4-208ENST00000439029 RAD17O75943 681 aa13.21□□□□□ -0.29
SMPD4-208ENST00000439029 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
SMPD4-208ENST00000439029 SAGE1Q9NXZ1 904 aa13.21□□□□□ -0.29
SMPD4-208ENST00000439029 PGAP2Q9UHJ9 254 aa13.21□□□□□ -0.29
SMPD4-208ENST00000439029 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
SMPD4-208ENST00000439029 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
SMPD4-208ENST00000439029 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-208ENST00000439029 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-208ENST00000439029 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
SMPD4-208ENST00000439029 NBPF10Q6P3W6 841 aaKnown RBP13.2□□□□□ -0.3
SMPD4-208ENST00000439029 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
SMPD4-208ENST00000439029 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
SMPD4-208ENST00000439029 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
SMPD4-208ENST00000439029 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
SMPD4-208ENST00000439029 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
SMPD4-208ENST00000439029 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-208ENST00000439029 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
SMPD4-208ENST00000439029 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
SMPD4-208ENST00000439029 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
SMPD4-208ENST00000439029 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
SMPD4-208ENST00000439029 GPTP24298 496 aa13.17□□□□□ -0.3
SMPD4-208ENST00000439029 SAMD7Q7Z3H4 446 aa13.17□□□□□ -0.3
SMPD4-208ENST00000439029 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
SMPD4-208ENST00000439029 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
SMPD4-208ENST00000439029 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
SMPD4-208ENST00000439029 HDAC9Q9UKV0 1011 aa13.17□□□□□ -0.3
SMPD4-208ENST00000439029 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 KRT26Q7Z3Y9 468 aa13.16□□□□□ -0.3
SMPD4-208ENST00000439029 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
SMPD4-208ENST00000439029 C2orf69Q8N8R5 385 aa13.16□□□□□ -0.3
SMPD4-208ENST00000439029 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 POLR2AP24928 1970 aaKnown RBP13.16□□□□□ -0.3
SMPD4-208ENST00000439029 H7C1D1 291 aa13.15□□□□□ -0.3
SMPD4-208ENST00000439029 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
SMPD4-208ENST00000439029 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
SMPD4-208ENST00000439029 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
SMPD4-208ENST00000439029 CRAMP1Q96RY5 1269 aa13.15□□□□□ -0.3
SMPD4-208ENST00000439029 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
SMPD4-208ENST00000439029 EGFRP00533 1210 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 SLC10A3P09131 477 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMPD4-208ENST00000439029 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-208ENST00000439029 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-208ENST00000439029 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
SMPD4-208ENST00000439029 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
SMPD4-208ENST00000439029 TNIP1Q15025 636 aa13.13□□□□□ -0.31
SMPD4-208ENST00000439029 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
SMPD4-208ENST00000439029 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
SMPD4-208ENST00000439029 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-208ENST00000439029 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-208ENST00000439029 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
SMPD4-208ENST00000439029 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
SMPD4-208ENST00000439029 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
SMPD4-208ENST00000439029 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
SMPD4-208ENST00000439029 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
SMPD4-208ENST00000439029 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
SMPD4-208ENST00000439029 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
SMPD4-208ENST00000439029 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
SMPD4-208ENST00000439029 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
SMPD4-208ENST00000439029 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms