RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SIL1Q9H173 461 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 CREB3L3Q68CJ9 461 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 ISM2Q6H9L7 571 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-204ENST00000438964 ERBB3P21860 1342 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 SYT10Q6XYQ8 523 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 CLSTN2Q9H4D0 955 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
ACTN1-204ENST00000438964 CAPN2P17655 700 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 LMTK2Q8IWU2 1503 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 ZKSCAN1P17029 563 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-204ENST00000438964 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 BOLA2Q9H3K6 86 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
ACTN1-204ENST00000438964 NMIQ13287 307 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-204ENST00000438964 TIGD1Q96MW7 591 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
ACTN1-204ENST00000438964 BIN1O00499 593 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 SEC31AO94979 1220 aaKnown RBP15.77■□□□□ 0.12
ACTN1-204ENST00000438964 HSP90B1P14625 803 aaKnown RBP15.77■□□□□ 0.12
ACTN1-204ENST00000438964 GOLGA8FQ08AF8 430 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 GOLGA8DPQ0D2H9 430 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 AOPEPQ8N6M6 819 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 TDRD7Q8NHU6 1098 aaKnown RBP15.77■□□□□ 0.12
ACTN1-204ENST00000438964 KLHDC4Q8TBB5 520 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
ACTN1-204ENST00000438964 PRR36Q9H6K5 1346 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 PI4KAP2A4QPH2 592 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 PI4KAP1Q8N8J0 262 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 BRF1Q92994 677 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 SLC52A1Q9NWF4 448 aa15.77■□□□□ 0.11
ACTN1-204ENST00000438964 TLR7Q9NYK1 1049 aaKnown RBP15.77■□□□□ 0.11
ACTN1-204ENST00000438964 A0A0D9SFI3 127 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 H3BQV1 296 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 GYS2P54840 703 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
ACTN1-204ENST00000438964 AACSQ86V21 672 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 HNRNPH2P55795 449 aaKnown RBP15.76■□□□□ 0.11
ACTN1-204ENST00000438964 NOL10Q9BSC4 688 aaKnown RBP15.76■□□□□ 0.11
ACTN1-204ENST00000438964 CCZ1BP86790 482 aa15.76■□□□□ 0.11
ACTN1-204ENST00000438964 CCZ1P86791 482 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-204ENST00000438964 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
ACTN1-204ENST00000438964 SLC27A2O14975 620 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 NPHP3Q7Z494 1330 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 ZNF589Q86UQ0 364 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-204ENST00000438964 EYA1Q99502 592 aa15.75■□□□□ 0.11
ACTN1-204ENST00000438964 SH2B1Q9NRF2 756 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-204ENST00000438964 TTC21AQ8NDW8 1320 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 CCDC66A2RUB6 948 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 KCNQ3O43525 872 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 SMC2O95347 1197 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 SLU7O95391 586 aaKnown RBP15.74■□□□□ 0.11
ACTN1-204ENST00000438964 IQCB1Q15051 598 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 NECTIN1Q15223 517 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 ARHGAP29Q52LW3 1261 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 CCAR2Q8N163 923 aaKnown RBP15.74■□□□□ 0.11
ACTN1-204ENST00000438964 CHPF2Q9P2E5 772 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 CLCN6P51797 869 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
ACTN1-204ENST00000438964 ZSCAN31Q96LW9 406 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-204ENST00000438964 SCAND2PQ9GZW5 306 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-204ENST00000438964 DDX19AQ9NUU7 478 aaKnown RBP15.74■□□□□ 0.11
ACTN1-204ENST00000438964 AMPHP49418 695 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 CLASRPQ8N2M8 674 aaKnown RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 CCDC34Q96HJ3 373 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 HSP90AA4PQ58FG1 418 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 FSD1Q9BTV5 496 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 ALKQ9UM73 1620 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 TUBGCP6Q96RT7 1819 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 HECW2Q9P2P5 1572 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 CCT2P78371 535 aaKnown RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 SNW1Q13573 536 aaKnown RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
ACTN1-204ENST00000438964 TAF3Q5VWG9 929 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
ACTN1-204ENST00000438964 ACEP12821 1306 aa15.72■□□□□ 0.11
ACTN1-204ENST00000438964 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
ACTN1-204ENST00000438964 ST5P78524 1137 aa15.72■□□□□ 0.11
ACTN1-204ENST00000438964 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
ACTN1-204ENST00000438964 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
ACTN1-204ENST00000438964 TTC21BQ7Z4L5 1316 aa15.72■□□□□ 0.11
ACTN1-204ENST00000438964 METP08581 1390 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms