RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-209ENST00000437951 PRC1O43663 620 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 ATP2C2O75185 946 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 SKILP12757 684 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 INPP5BP32019 993 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 AACSQ86V21 672 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 PRPF4BQ13523 1007 aaKnown RBP13.16□□□□□ -0.3
PTCH1-209ENST00000437951 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 AP1ARQ63HQ0 302 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
PTCH1-209ENST00000437951 USP37Q86T82 979 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
PTCH1-209ENST00000437951 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
PTCH1-209ENST00000437951 BCAP29Q9UHQ4 241 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 UBASH3AP57075 661 aa13.16□□□□□ -0.3
PTCH1-209ENST00000437951 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
PTCH1-209ENST00000437951 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-209ENST00000437951 NEDD9Q14511 834 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 STX6O43752 255 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
PTCH1-209ENST00000437951 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.31
PTCH1-209ENST00000437951 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.31
PTCH1-209ENST00000437951 PSMC4P43686 418 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 NDC80O14777 642 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 MX1P20591 662 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 CLUL1Q15846 466 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 RASSF2P50749 326 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 TNNC1P63316 161 aa13.14□□□□□ -0.31
PTCH1-209ENST00000437951 RBBP5Q15291 538 aaKnown RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 HMOX1P09601 288 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 THEGQ9P2T0 379 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 SELENOSQ9BQE4 189 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-209ENST00000437951 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
PTCH1-209ENST00000437951 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 SLC8A1P32418 973 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 AKR1B10O60218 316 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 KCNG4Q8TDN1 519 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-209ENST00000437951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-209ENST00000437951 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
PTCH1-209ENST00000437951 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
PTCH1-209ENST00000437951 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 ZMAT2Q96NC0 199 aaKnown RBP13.11□□□□□ -0.31
PTCH1-209ENST00000437951 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 SSFA2P28290 1259 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTCH1-209ENST00000437951 N4BP3O15049 544 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 ZEB2O60315 1214 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 MGEA5O60502 916 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 MTHFSP49914 203 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
PTCH1-209ENST00000437951 CPLX3Q8WVH0 158 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 DNA2P51530 1060 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 325.4 ms