RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.92■□□□□ 0.46
LINC01007-202ENST00000437900 ZPR1O75312 459 aa17.92■□□□□ 0.46
LINC01007-202ENST00000437900 PCCAP05165 728 aaPredicted RBP17.92■□□□□ 0.46
LINC01007-202ENST00000437900 EN1Q05925 392 aaPredicted RBP17.92■□□□□ 0.46
LINC01007-202ENST00000437900 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
LINC01007-202ENST00000437900 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
LINC01007-202ENST00000437900 RFC4P35249 363 aa17.91■□□□□ 0.46
LINC01007-202ENST00000437900 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
LINC01007-202ENST00000437900 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
LINC01007-202ENST00000437900 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
LINC01007-202ENST00000437900 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
LINC01007-202ENST00000437900 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
LINC01007-202ENST00000437900 HMMRO75330 724 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 ATP8B2P98198 1209 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 SUCLG2Q96I99 432 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 CDHR2Q9BYE9 1310 aa17.9■□□□□ 0.46
LINC01007-202ENST00000437900 GPTP24298 496 aa17.89■□□□□ 0.45
LINC01007-202ENST00000437900 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
LINC01007-202ENST00000437900 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
LINC01007-202ENST00000437900 PLA2G12BQ9BX93 195 aa17.89■□□□□ 0.45
LINC01007-202ENST00000437900 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
LINC01007-202ENST00000437900 PHF14O94880 888 aa17.88■□□□□ 0.45
LINC01007-202ENST00000437900 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
LINC01007-202ENST00000437900 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
LINC01007-202ENST00000437900 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC01007-202ENST00000437900 POLA2Q14181 598 aa17.88■□□□□ 0.45
LINC01007-202ENST00000437900 TFCP2L1Q9NZI6 479 aa17.88■□□□□ 0.45
LINC01007-202ENST00000437900 COL24A1Q17RW2 1714 aa17.87■□□□□ 0.45
LINC01007-202ENST00000437900 PNMA6EA0A0J9YXQ4 647 aa17.87■□□□□ 0.45
LINC01007-202ENST00000437900 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
LINC01007-202ENST00000437900 BICC1Q9H694 974 aaKnown RBP17.87■□□□□ 0.45
LINC01007-202ENST00000437900 DCTPP1Q9H773 170 aa17.87■□□□□ 0.45
LINC01007-202ENST00000437900 EPHA10Q5JZY3 1008 aa17.86■□□□□ 0.45
LINC01007-202ENST00000437900 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
LINC01007-202ENST00000437900 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
LINC01007-202ENST00000437900 DEFB132Q7Z7B7 95 aa17.86■□□□□ 0.45
LINC01007-202ENST00000437900 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
LINC01007-202ENST00000437900 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
LINC01007-202ENST00000437900 TUBGCP6Q96RT7 1819 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 QSER1Q2KHR3 1735 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 NTSR2O95665 410 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 GYS1P13807 737 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 FOXO4P98177 505 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 SLC15A2Q16348 729 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 TBC1D9BQ66K14 1250 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
LINC01007-202ENST00000437900 ANO8Q9HCE9 1232 aaPredicted RBP17.85■□□□□ 0.45
LINC01007-202ENST00000437900 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
LINC01007-202ENST00000437900 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
LINC01007-202ENST00000437900 PNPLA7Q6ZV29 1317 aa17.83■□□□□ 0.45
LINC01007-202ENST00000437900 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.45
LINC01007-202ENST00000437900 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.45
LINC01007-202ENST00000437900 SETDB2Q96T68 719 aa17.83■□□□□ 0.45
LINC01007-202ENST00000437900 STK32BQ9NY57 414 aa17.83■□□□□ 0.45
LINC01007-202ENST00000437900 CARMIL3Q8ND23 1372 aa17.83■□□□□ 0.44
LINC01007-202ENST00000437900 NYXQ9GZU5 481 aa17.82■□□□□ 0.44
LINC01007-202ENST00000437900 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
LINC01007-202ENST00000437900 CSF1RP07333 972 aa17.82■□□□□ 0.44
LINC01007-202ENST00000437900 NFIXQ14938 502 aa17.82■□□□□ 0.44
LINC01007-202ENST00000437900 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
LINC01007-202ENST00000437900 LAMB2P55268 1798 aa17.81■□□□□ 0.44
LINC01007-202ENST00000437900 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
LINC01007-202ENST00000437900 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
LINC01007-202ENST00000437900 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
LINC01007-202ENST00000437900 PDE8AO60658 829 aa17.8■□□□□ 0.44
LINC01007-202ENST00000437900 TM4SF1P30408 202 aa17.8■□□□□ 0.44
LINC01007-202ENST00000437900 NUCB1Q02818 461 aa17.8■□□□□ 0.44
LINC01007-202ENST00000437900 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
LINC01007-202ENST00000437900 NLGN1Q8N2Q7 840 aa17.8■□□□□ 0.44
LINC01007-202ENST00000437900 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC01007-202ENST00000437900 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
LINC01007-202ENST00000437900 CTSWP56202 376 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 RIC1Q4ADV7 1423 aa17.79■□□□□ 0.44
LINC01007-202ENST00000437900 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
LINC01007-202ENST00000437900 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
LINC01007-202ENST00000437900 PDZRN3Q9UPQ7 1066 aa17.78■□□□□ 0.44
LINC01007-202ENST00000437900 RTL9Q8NET4 1388 aa17.78■□□□□ 0.44
LINC01007-202ENST00000437900 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
LINC01007-202ENST00000437900 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
LINC01007-202ENST00000437900 MYH3P11055 1940 aa17.77■□□□□ 0.44
LINC01007-202ENST00000437900 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
LINC01007-202ENST00000437900 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
LINC01007-202ENST00000437900 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
LINC01007-202ENST00000437900 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 SURF6O75683 361 aaKnown RBP17.75■□□□□ 0.43
LINC01007-202ENST00000437900 HCLS1P14317 486 aaPredicted RBP17.75■□□□□ 0.43
LINC01007-202ENST00000437900 PTPN12Q05209 780 aaKnown RBP17.75■□□□□ 0.43
LINC01007-202ENST00000437900 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 POLRMTO00411 1230 aaKnown RBP17.75■□□□□ 0.43
LINC01007-202ENST00000437900 DDR1Q08345 913 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms