RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
HMGN1P19-201ENST00000436976 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
HMGN1P19-201ENST00000436976 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 CRY2Q49AN0 593 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 LARGE2Q8N3Y3 721 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 ADARB2Q9NS39 739 aaKnown RBP22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 ZNF652Q9Y2D9 606 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 ABCC12Q96J65 1359 aa22.19■■□□□ 1.14
HMGN1P19-201ENST00000436976 MKI67P46013 3256 aaKnown RBP22.18■■□□□ 1.14
HMGN1P19-201ENST00000436976 NOGQ13253 232 aa22.16■■□□□ 1.14
HMGN1P19-201ENST00000436976 CC2D2BQ6DHV5 1058 aa22.16■■□□□ 1.14
HMGN1P19-201ENST00000436976 ZNF408Q9H9D4 720 aa22.16■■□□□ 1.14
HMGN1P19-201ENST00000436976 PGAP2Q9UHJ9 254 aa22.16■■□□□ 1.14
HMGN1P19-201ENST00000436976 HLFQ16534 295 aa22.15■■□□□ 1.14
HMGN1P19-201ENST00000436976 CEMIPQ8WUJ3 1361 aa22.14■■□□□ 1.14
HMGN1P19-201ENST00000436976 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
HMGN1P19-201ENST00000436976 NBPF26B4DH59 902 aa22.14■■□□□ 1.13
HMGN1P19-201ENST00000436976 NBPF10Q6P3W6 841 aaKnown RBP22.14■■□□□ 1.13
HMGN1P19-201ENST00000436976 NBPF15Q8N660 670 aa22.14■■□□□ 1.13
HMGN1P19-201ENST00000436976 HIRAP54198 1017 aaPredicted RBP22.13■■□□□ 1.13
HMGN1P19-201ENST00000436976 NIM1KQ8IY84 436 aa22.13■■□□□ 1.13
HMGN1P19-201ENST00000436976 RIC1Q4ADV7 1423 aa22.13■■□□□ 1.13
HMGN1P19-201ENST00000436976 NPC1L1Q9UHC9 1359 aa22.12■■□□□ 1.13
HMGN1P19-201ENST00000436976 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
HMGN1P19-201ENST00000436976 RGL2O15211 777 aa22.12■■□□□ 1.13
HMGN1P19-201ENST00000436976 NUTM1Q86Y26 1132 aa22.12■■□□□ 1.13
HMGN1P19-201ENST00000436976 FAM155AB1AL88 458 aaPredicted RBP22.11■■□□□ 1.13
HMGN1P19-201ENST00000436976 GMPSP49915 693 aaPredicted RBP22.11■■□□□ 1.13
HMGN1P19-201ENST00000436976 CXCL9Q07325 125 aa22.11■■□□□ 1.13
HMGN1P19-201ENST00000436976 AOC3Q16853 763 aa22.11■■□□□ 1.13
HMGN1P19-201ENST00000436976 DLK2Q6UY11 383 aa22.11■■□□□ 1.13
HMGN1P19-201ENST00000436976 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 HUNKP57058 714 aa22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 SAGE1Q9NXZ1 904 aa22.1■■□□□ 1.13
HMGN1P19-201ENST00000436976 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
HMGN1P19-201ENST00000436976 GRIPAP1Q4V328 841 aa22.09■■□□□ 1.13
HMGN1P19-201ENST00000436976 AMER1Q5JTC6 1135 aaPredicted RBP22.09■■□□□ 1.13
HMGN1P19-201ENST00000436976 TRPM4Q8TD43 1214 aa22.09■■□□□ 1.13
HMGN1P19-201ENST00000436976 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.13
HMGN1P19-201ENST00000436976 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.13
HMGN1P19-201ENST00000436976 GAS2L2Q8NHY3 880 aa22.08■■□□□ 1.13
HMGN1P19-201ENST00000436976 ZC3H15Q8WU90 426 aaKnown RBP22.08■■□□□ 1.13
HMGN1P19-201ENST00000436976 KNSTRNQ9Y448 316 aa22.08■■□□□ 1.13
HMGN1P19-201ENST00000436976 KIF7Q2M1P5 1343 aa22.07■■□□□ 1.12
HMGN1P19-201ENST00000436976 LAMB2P55268 1798 aa22.07■■□□□ 1.12
HMGN1P19-201ENST00000436976 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
HMGN1P19-201ENST00000436976 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
HMGN1P19-201ENST00000436976 RNF186Q9NXI6 227 aa22.07■■□□□ 1.12
HMGN1P19-201ENST00000436976 SHTN1A0MZ66 631 aa22.06■■□□□ 1.12
HMGN1P19-201ENST00000436976 TRPA1O75762 1119 aa22.06■■□□□ 1.12
HMGN1P19-201ENST00000436976 SNRPA1P09661 255 aaKnown RBP22.06■■□□□ 1.12
HMGN1P19-201ENST00000436976 TAF1P21675 1872 aa22.06■■□□□ 1.12
HMGN1P19-201ENST00000436976 KIF23Q02241 960 aaPredicted RBP22.05■■□□□ 1.12
HMGN1P19-201ENST00000436976 RGMBQ6NW40 437 aa22.05■■□□□ 1.12
HMGN1P19-201ENST00000436976 CRAMP1Q96RY5 1269 aa22.05■■□□□ 1.12
HMGN1P19-201ENST00000436976 ZNRF3Q9ULT6 936 aa22.05■■□□□ 1.12
HMGN1P19-201ENST00000436976 C3orf67Q6ZVT6 689 aa22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 CTU1Q7Z7A3 348 aaKnown RBP22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 CENPFP49454 3210 aa22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 CDHR2Q9BYE9 1310 aa22.04■■□□□ 1.12
HMGN1P19-201ENST00000436976 HPS5Q9UPZ3 1129 aa22.03■■□□□ 1.12
HMGN1P19-201ENST00000436976 VPS33BQ9H267 617 aa22.02■■□□□ 1.12
HMGN1P19-201ENST00000436976 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
HMGN1P19-201ENST00000436976 BRCA2P51587 3418 aa22.02■■□□□ 1.11
HMGN1P19-201ENST00000436976 RBM17Q96I25 401 aaKnown RBP22.01■■□□□ 1.11
HMGN1P19-201ENST00000436976 ANKRD36CQ5JPF3 1778 aa22.01■■□□□ 1.11
HMGN1P19-201ENST00000436976 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
HMGN1P19-201ENST00000436976 RAD17O75943 681 aa22■■□□□ 1.11
HMGN1P19-201ENST00000436976 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
HMGN1P19-201ENST00000436976 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
HMGN1P19-201ENST00000436976 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
HMGN1P19-201ENST00000436976 RTFDC1Q9BY42 306 aaPredicted RBP22■■□□□ 1.11
HMGN1P19-201ENST00000436976 GBA2Q9HCG7 927 aaPredicted RBP22■■□□□ 1.11
HMGN1P19-201ENST00000436976 CNOT7Q9UIV1 285 aaKnown RBP22■■□□□ 1.11
HMGN1P19-201ENST00000436976 HTTP42858 3142 aa22■■□□□ 1.11
HMGN1P19-201ENST00000436976 CSRNP1Q96S65 589 aa21.99■■□□□ 1.11
HMGN1P19-201ENST00000436976 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
HMGN1P19-201ENST00000436976 U2SURPO15042 1029 aaKnown RBP21.98■■□□□ 1.11
HMGN1P19-201ENST00000436976 SUSD4Q5VX71 490 aa21.98■■□□□ 1.11
HMGN1P19-201ENST00000436976 CCDC102AQ96A19 550 aa21.98■■□□□ 1.11
HMGN1P19-201ENST00000436976 DUOX1Q9NRD9 1551 aa21.98■■□□□ 1.11
HMGN1P19-201ENST00000436976 YDJCA8MPS7 323 aa21.97■■□□□ 1.11
HMGN1P19-201ENST00000436976 GPTP24298 496 aa21.97■■□□□ 1.11
HMGN1P19-201ENST00000436976 ZNF157P51786 506 aaPredicted RBP21.97■■□□□ 1.11
HMGN1P19-201ENST00000436976 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 EGFRP00533 1210 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 SLC10A3P09131 477 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 KIAA2012Q0VF49 1180 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 HABP4Q5JVS0 413 aaKnown RBP21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 MICALL2Q8IY33 904 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 GCC1Q96CN9 775 aa21.96■■□□□ 1.11
HMGN1P19-201ENST00000436976 MAP3K15Q6ZN16 1313 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms