RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 NPC1L1Q9UHC9 1359 aa19.78■□□□□ 0.76
HDAC8-213ENST00000436675 LMOD1P29536 600 aaPredicted RBP19.77■□□□□ 0.76
HDAC8-213ENST00000436675 MAP2K1Q02750 393 aaPredicted RBP19.77■□□□□ 0.76
HDAC8-213ENST00000436675 NUDCQ9Y266 331 aa19.77■□□□□ 0.76
HDAC8-213ENST00000436675 EPS15P42566 896 aa19.76■□□□□ 0.75
HDAC8-213ENST00000436675 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
HDAC8-213ENST00000436675 PSMD1Q99460 953 aa19.76■□□□□ 0.75
HDAC8-213ENST00000436675 TRPM7Q96QT4 1865 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 TRAF5O00463 557 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 GPTP24298 496 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 FAM161AQ3B820 660 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 SNED1Q8TER0 1413 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 LAMB4A4D0S4 1761 aa19.75■□□□□ 0.75
HDAC8-213ENST00000436675 CRY2Q49AN0 593 aa19.74■□□□□ 0.75
HDAC8-213ENST00000436675 CYP4F22Q6NT55 531 aa19.74■□□□□ 0.75
HDAC8-213ENST00000436675 CAPNS2Q96L46 248 aa19.74■□□□□ 0.75
HDAC8-213ENST00000436675 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
HDAC8-213ENST00000436675 RRP7AQ9Y3A4 280 aaKnown RBP19.74■□□□□ 0.75
HDAC8-213ENST00000436675 RGL2O15211 777 aa19.73■□□□□ 0.75
HDAC8-213ENST00000436675 SCNN1DP51172 638 aa19.73■□□□□ 0.75
HDAC8-213ENST00000436675 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
HDAC8-213ENST00000436675 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
HDAC8-213ENST00000436675 TSKSQ9UJT2 592 aa19.73■□□□□ 0.75
HDAC8-213ENST00000436675 CCDC85CA6NKD9 419 aa19.72■□□□□ 0.75
HDAC8-213ENST00000436675 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
HDAC8-213ENST00000436675 GPR101Q96P66 508 aaPredicted RBP19.72■□□□□ 0.75
HDAC8-213ENST00000436675 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
HDAC8-213ENST00000436675 MYL6BP14649 208 aa19.71■□□□□ 0.75
HDAC8-213ENST00000436675 ZBTB3Q9H5J0 574 aa19.71■□□□□ 0.75
HDAC8-213ENST00000436675 MAP3K15Q6ZN16 1313 aa19.71■□□□□ 0.75
HDAC8-213ENST00000436675 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 PPEF1O14829 653 aaPredicted RBP19.7■□□□□ 0.74
HDAC8-213ENST00000436675 AOC2O75106 756 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 ECE1P42892 770 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 SUSD4Q5VX71 490 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 CST9Q5W186 159 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 UBN2Q6ZU65 1347 aa19.7■□□□□ 0.74
HDAC8-213ENST00000436675 ERVV-1B6SEH8 477 aa19.69■□□□□ 0.74
HDAC8-213ENST00000436675 HTATSF1O43719 755 aaKnown RBP19.69■□□□□ 0.74
HDAC8-213ENST00000436675 PPP2R1AP30153 589 aa19.69■□□□□ 0.74
HDAC8-213ENST00000436675 HOXA10P31260 410 aaPredicted RBP19.69■□□□□ 0.74
HDAC8-213ENST00000436675 C3orf67Q6ZVT6 689 aa19.69■□□□□ 0.74
HDAC8-213ENST00000436675 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
HDAC8-213ENST00000436675 RBM17Q96I25 401 aaKnown RBP19.69■□□□□ 0.74
HDAC8-213ENST00000436675 PPIP5K2O43314 1243 aa19.68■□□□□ 0.74
HDAC8-213ENST00000436675 USP50Q70EL3 339 aaPredicted RBP19.68■□□□□ 0.74
HDAC8-213ENST00000436675 THSD7BQ9C0I4 1608 aa19.68■□□□□ 0.74
HDAC8-213ENST00000436675 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
HDAC8-213ENST00000436675 CASP8AP2Q9UKL3 1982 aa19.67■□□□□ 0.74
HDAC8-213ENST00000436675 AOC3Q16853 763 aa19.67■□□□□ 0.74
HDAC8-213ENST00000436675 CRAMP1Q96RY5 1269 aa19.66■□□□□ 0.74
HDAC8-213ENST00000436675 THUMPD2Q9BTF0 503 aaKnown RBP19.66■□□□□ 0.74
HDAC8-213ENST00000436675 TLL2Q9Y6L7 1015 aa19.66■□□□□ 0.74
HDAC8-213ENST00000436675 SLC34A2O95436 690 aa19.65■□□□□ 0.74
HDAC8-213ENST00000436675 NTSR2O95665 410 aa19.65■□□□□ 0.74
HDAC8-213ENST00000436675 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
HDAC8-213ENST00000436675 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
HDAC8-213ENST00000436675 RIC1Q4ADV7 1423 aa19.65■□□□□ 0.74
HDAC8-213ENST00000436675 CELF2O95319 508 aaKnown RBP19.64■□□□□ 0.73
HDAC8-213ENST00000436675 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
HDAC8-213ENST00000436675 MLLT1Q03111 559 aaPredicted RBP19.64■□□□□ 0.73
HDAC8-213ENST00000436675 GRIPAP1Q4V328 841 aa19.64■□□□□ 0.73
HDAC8-213ENST00000436675 ZNF34Q8IZ26 560 aa19.64■□□□□ 0.73
HDAC8-213ENST00000436675 TMX4Q9H1E5 349 aaPredicted RBP19.64■□□□□ 0.73
HDAC8-213ENST00000436675 GPRC5DQ9NZD1 345 aa19.64■□□□□ 0.73
HDAC8-213ENST00000436675 CXCL9Q07325 125 aa19.63■□□□□ 0.73
HDAC8-213ENST00000436675 GLIS2Q9BZE0 524 aaPredicted RBP19.63■□□□□ 0.73
HDAC8-213ENST00000436675 ZNF408Q9H9D4 720 aa19.63■□□□□ 0.73
HDAC8-213ENST00000436675 IBTKQ9P2D0 1353 aaPredicted RBP19.62■□□□□ 0.73
HDAC8-213ENST00000436675 GMPSP49915 693 aaPredicted RBP19.62■□□□□ 0.73
HDAC8-213ENST00000436675 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
HDAC8-213ENST00000436675 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
HDAC8-213ENST00000436675 NEFMP07197 916 aa19.61■□□□□ 0.73
HDAC8-213ENST00000436675 MAP2K2P36507 400 aa19.61■□□□□ 0.73
HDAC8-213ENST00000436675 GIGYF2Q6Y7W6 1299 aaKnown RBP19.61■□□□□ 0.73
HDAC8-213ENST00000436675 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
HDAC8-213ENST00000436675 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
HDAC8-213ENST00000436675 ATP6V0A2Q9Y487 856 aa19.61■□□□□ 0.73
HDAC8-213ENST00000436675 ABCC4O15439 1325 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 RAD17O75943 681 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 SAPCD2Q86UD0 394 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 TAF1P21675 1872 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 LAMB2P55268 1798 aa19.6■□□□□ 0.73
HDAC8-213ENST00000436675 UTP14AQ9BVJ6 771 aaKnown RBP19.59■□□□□ 0.73
HDAC8-213ENST00000436675 MCOLN1Q9GZU1 580 aa19.59■□□□□ 0.73
HDAC8-213ENST00000436675 ANXA1P04083 346 aa19.58■□□□□ 0.72
HDAC8-213ENST00000436675 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.72
HDAC8-213ENST00000436675 PARP10Q53GL7 1025 aa19.58■□□□□ 0.72
HDAC8-213ENST00000436675 CIAPIN1Q6FI81 312 aa19.58■□□□□ 0.72
HDAC8-213ENST00000436675 DPP8Q6V1X1 898 aaPredicted RBP19.58■□□□□ 0.72
HDAC8-213ENST00000436675 SUPT20HQ8NEM7 779 aa19.58■□□□□ 0.72
HDAC8-213ENST00000436675 SHTN1A0MZ66 631 aa19.57■□□□□ 0.72
HDAC8-213ENST00000436675 HIRAP54198 1017 aaPredicted RBP19.57■□□□□ 0.72
HDAC8-213ENST00000436675 MPNDQ8N594 471 aa19.57■□□□□ 0.72
HDAC8-213ENST00000436675 TRPM4Q8TD43 1214 aa19.57■□□□□ 0.72
HDAC8-213ENST00000436675 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
HDAC8-213ENST00000436675 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms