RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 BCL2L12Q9HB09 334 aa26.78■■□□□ 1.88
YBX1-203ENST00000436427 ANO8Q9HCE9 1232 aaPredicted RBP26.78■■□□□ 1.88
YBX1-203ENST00000436427 NIP7Q9Y221 180 aaKnown RBP eCLIP26.78■■□□□ 1.88
YBX1-203ENST00000436427 LRRFIP2Q9Y608 721 aaKnown RBP26.78■■□□□ 1.88
YBX1-203ENST00000436427 UTYO14607 1347 aa26.77■■□□□ 1.88
YBX1-203ENST00000436427 RGL2O15211 777 aa26.77■■□□□ 1.88
YBX1-203ENST00000436427 UBE3BQ7Z3V4 1068 aa26.77■■□□□ 1.88
YBX1-203ENST00000436427 JARID2Q92833 1246 aaPredicted RBP26.77■■□□□ 1.88
YBX1-203ENST00000436427 UBN2Q6ZU65 1347 aa26.77■■□□□ 1.88
YBX1-203ENST00000436427 MSH5O43196 834 aa26.76■■□□□ 1.87
YBX1-203ENST00000436427 HDAC5Q9UQL6 1122 aa26.76■■□□□ 1.87
YBX1-203ENST00000436427 SLC15A2Q16348 729 aa26.75■■□□□ 1.87
YBX1-203ENST00000436427 RTL5Q5HYW3 569 aaPredicted RBP26.75■■□□□ 1.87
YBX1-203ENST00000436427 FLAD1Q8NFF5 587 aa26.75■■□□□ 1.87
YBX1-203ENST00000436427 BICDL1Q6ZP65 573 aa26.75■■□□□ 1.87
YBX1-203ENST00000436427 H7C1W4 665 aa26.74■■□□□ 1.87
YBX1-203ENST00000436427 PARP10Q53GL7 1025 aa26.74■■□□□ 1.87
YBX1-203ENST00000436427 TBC1D9BQ66K14 1250 aa26.74■■□□□ 1.87
YBX1-203ENST00000436427 COL23A1Q86Y22 540 aaPredicted RBP26.74■■□□□ 1.87
YBX1-203ENST00000436427 FAM177BA6PVY3 158 aa26.73■■□□□ 1.87
YBX1-203ENST00000436427 CEP85Q6P2H3 762 aa26.73■■□□□ 1.87
YBX1-203ENST00000436427 SUCLG2Q96I99 432 aa26.73■■□□□ 1.87
YBX1-203ENST00000436427 PNPLA7Q6ZV29 1317 aa26.73■■□□□ 1.87
YBX1-203ENST00000436427 ZBTB38Q8NAP3 1195 aaPredicted RBP26.72■■□□□ 1.87
YBX1-203ENST00000436427 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
YBX1-203ENST00000436427 PCCAP05165 728 aaPredicted RBP26.71■■□□□ 1.87
YBX1-203ENST00000436427 GYS1P13807 737 aa26.71■■□□□ 1.87
YBX1-203ENST00000436427 SUSD4Q5VX71 490 aa26.71■■□□□ 1.87
YBX1-203ENST00000436427 RPAP2Q8IXW5 612 aaPredicted RBP26.71■■□□□ 1.87
YBX1-203ENST00000436427 FAM89AQ96GI7 184 aa26.71■■□□□ 1.87
YBX1-203ENST00000436427 RWDD1Q9H446 243 aaPredicted RBP26.71■■□□□ 1.87
YBX1-203ENST00000436427 CASP7P55210 303 aa26.7■■□□□ 1.87
YBX1-203ENST00000436427 PPP1R42Q7Z4L9 355 aa26.7■■□□□ 1.87
YBX1-203ENST00000436427 ANKRD44Q8N8A2 993 aa26.7■■□□□ 1.87
YBX1-203ENST00000436427 SETDB2Q96T68 719 aa26.7■■□□□ 1.87
YBX1-203ENST00000436427 IGHDP01880 384 aa26.7■■□□□ 1.86
YBX1-203ENST00000436427 UTP14AQ9BVJ6 771 aaKnown RBP26.7■■□□□ 1.86
YBX1-203ENST00000436427 SIRT2Q8IXJ6 389 aa26.69■■□□□ 1.86
YBX1-203ENST00000436427 BICC1Q9H694 974 aaKnown RBP26.69■■□□□ 1.86
YBX1-203ENST00000436427 HDAC1Q13547 482 aaPredicted RBP26.68■■□□□ 1.86
YBX1-203ENST00000436427 KAZALD1Q96I82 304 aa26.68■■□□□ 1.86
YBX1-203ENST00000436427 ILDR2Q71H61 639 aa26.67■■□□□ 1.86
YBX1-203ENST00000436427 QSER1Q2KHR3 1735 aa26.67■■□□□ 1.86
YBX1-203ENST00000436427 NTSR2O95665 410 aa26.66■■□□□ 1.86
YBX1-203ENST00000436427 SYNE4Q8N205 404 aa26.66■■□□□ 1.86
YBX1-203ENST00000436427 HMMRO75330 724 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 ATP8B2P98198 1209 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 NFIXQ14938 502 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 EPHA10Q5JZY3 1008 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 CDHR2Q9BYE9 1310 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 PNMA6EA0A0J9YXQ4 647 aa26.65■■□□□ 1.86
YBX1-203ENST00000436427 CENPQQ7L2Z9 268 aaPredicted RBP26.65■■□□□ 1.86
YBX1-203ENST00000436427 COL24A1Q17RW2 1714 aa26.64■■□□□ 1.86
YBX1-203ENST00000436427 CARMIL3Q8ND23 1372 aa26.64■■□□□ 1.85
YBX1-203ENST00000436427 KDM2BQ8NHM5 1336 aa26.64■■□□□ 1.85
YBX1-203ENST00000436427 IRS4O14654 1257 aaPredicted RBP26.64■■□□□ 1.85
YBX1-203ENST00000436427 SRGAP3O43295 1099 aa26.64■■□□□ 1.85
YBX1-203ENST00000436427 NBPF5PQ86XG9 351 aaPredicted RBP26.64■■□□□ 1.85
YBX1-203ENST00000436427 NUTM1Q86Y26 1132 aa26.64■■□□□ 1.85
YBX1-203ENST00000436427 GTF2E1P29083 439 aaPredicted RBP26.63■■□□□ 1.85
YBX1-203ENST00000436427 NYXQ9GZU5 481 aa26.63■■□□□ 1.85
YBX1-203ENST00000436427 FOXO4P98177 505 aa26.62■■□□□ 1.85
YBX1-203ENST00000436427 NLGN1Q8N2Q7 840 aa26.62■■□□□ 1.85
YBX1-203ENST00000436427 NPHP1O15259 732 aa26.61■■□□□ 1.85
YBX1-203ENST00000436427 MTX1Q13505 466 aa26.61■■□□□ 1.85
YBX1-203ENST00000436427 LMBR1LQ6UX01 489 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 TPTE2Q6XPS3 522 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 PLA2G12BQ9BX93 195 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 CHMP3Q9Y3E7 222 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 TM4SF1P30408 202 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 RABL6Q3YEC7 729 aaPredicted RBP26.6■■□□□ 1.85
YBX1-203ENST00000436427 ERFEQ4G0M1 354 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 MSL1Q68DK7 614 aa26.6■■□□□ 1.85
YBX1-203ENST00000436427 HCLS1P14317 486 aaPredicted RBP26.59■■□□□ 1.85
YBX1-203ENST00000436427 SSH3Q8TE77 659 aa26.59■■□□□ 1.85
YBX1-203ENST00000436427 PDE8AO60658 829 aa26.58■■□□□ 1.85
YBX1-203ENST00000436427 HSP90B1P14625 803 aaKnown RBP26.58■■□□□ 1.85
YBX1-203ENST00000436427 POLA2Q14181 598 aa26.58■■□□□ 1.85
YBX1-203ENST00000436427 CTSWP56202 376 aa26.56■■□□□ 1.84
YBX1-203ENST00000436427 DDR1Q08345 913 aa26.56■■□□□ 1.84
YBX1-203ENST00000436427 CNBD1Q8NA66 436 aa26.56■■□□□ 1.84
YBX1-203ENST00000436427 DDX60Q8IY21 1712 aaKnown RBP26.56■■□□□ 1.84
YBX1-203ENST00000436427 LAMB2P55268 1798 aa26.56■■□□□ 1.84
YBX1-203ENST00000436427 SERPINB2P05120 415 aa26.55■■□□□ 1.84
YBX1-203ENST00000436427 GCC1Q96CN9 775 aa26.55■■□□□ 1.84
YBX1-203ENST00000436427 CCDC85AQ96PX6 553 aaPredicted RBP26.55■■□□□ 1.84
YBX1-203ENST00000436427 PDGFDQ9GZP0 370 aaPredicted RBP26.55■■□□□ 1.84
YBX1-203ENST00000436427 POLRMTO00411 1230 aaKnown RBP26.55■■□□□ 1.84
YBX1-203ENST00000436427 CCDC24Q8N4L8 307 aa26.55■■□□□ 1.84
YBX1-203ENST00000436427 DCTPP1Q9H773 170 aa26.55■■□□□ 1.84
YBX1-203ENST00000436427 ABCC12Q96J65 1359 aa26.54■■□□□ 1.84
YBX1-203ENST00000436427 MYH3P11055 1940 aa26.54■■□□□ 1.84
YBX1-203ENST00000436427 SMC5Q8IY18 1101 aa26.54■■□□□ 1.84
YBX1-203ENST00000436427 CSF1RP07333 972 aa26.53■■□□□ 1.84
YBX1-203ENST00000436427 MMP10P09238 476 aa26.53■■□□□ 1.84
YBX1-203ENST00000436427 TTLL11Q8NHH1 800 aa26.53■■□□□ 1.84
YBX1-203ENST00000436427 EXOC6BQ9Y2D4 811 aa26.53■■□□□ 1.84
YBX1-203ENST00000436427 FAM161AQ3B820 660 aa26.52■■□□□ 1.84
YBX1-203ENST00000436427 PRR5LQ6MZQ0 368 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms