RNA–Protein interactions for RNA: ENST00000435827.6

NUDC-202, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 5

Gene NUDC, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-202ENST00000435827 PPP1R42Q7Z4L9 355 aa29.1■■■□□ 2.25
NUDC-202ENST00000435827 SMC1BQ8NDV3 1235 aa29.1■■■□□ 2.25
NUDC-202ENST00000435827 XAGE3Q8WTP9 111 aa29.1■■■□□ 2.25
NUDC-202ENST00000435827 NTSR2O95665 410 aa29.09■■■□□ 2.25
NUDC-202ENST00000435827 HDGFL1Q5TGJ6 251 aa29.09■■■□□ 2.25
NUDC-202ENST00000435827 GNAI1P63096 354 aa29.08■■■□□ 2.25
NUDC-202ENST00000435827 HSP90AB3PQ58FF7 597 aa29.08■■■□□ 2.25
NUDC-202ENST00000435827 CCDC93Q567U6 631 aa29.07■■■□□ 2.24
NUDC-202ENST00000435827 DUSP27Q5VZP5 1158 aa29.07■■■□□ 2.24
NUDC-202ENST00000435827 CHPF2Q9P2E5 772 aa29.07■■■□□ 2.24
NUDC-202ENST00000435827 ANP32CO43423 234 aa29.06■■■□□ 2.24
NUDC-202ENST00000435827 AIMP1Q12904 312 aaKnown RBP29.06■■■□□ 2.24
NUDC-202ENST00000435827 DBF4Q9UBU7 674 aaPredicted RBP29.06■■■□□ 2.24
NUDC-202ENST00000435827 HOXA10P31260 410 aaPredicted RBP29.05■■■□□ 2.24
NUDC-202ENST00000435827 DNAJC5GQ8N7S2 189 aa29.05■■■□□ 2.24
NUDC-202ENST00000435827 RNF123Q5XPI4 1314 aa29.04■■■□□ 2.24
NUDC-202ENST00000435827 UTP14AQ9BVJ6 771 aaKnown RBP29.04■■■□□ 2.24
NUDC-202ENST00000435827 TCIRG1Q13488 830 aa29.03■■■□□ 2.24
NUDC-202ENST00000435827 SLC10A5Q5PT55 438 aa29.03■■■□□ 2.24
NUDC-202ENST00000435827 RTKN2Q8IZC4 609 aa29.02■■■□□ 2.24
NUDC-202ENST00000435827 HYPKQ9NX55 129 aa29.02■■■□□ 2.24
NUDC-202ENST00000435827 CCDC27Q2M243 656 aa29.01■■■□□ 2.23
NUDC-202ENST00000435827 NLRP10Q86W26 655 aa29.01■■■□□ 2.23
NUDC-202ENST00000435827 RPGRQ92834 1020 aaKnown RBP29.01■■■□□ 2.23
NUDC-202ENST00000435827 FKBP4Q02790 459 aaKnown RBP eCLIP29■■■□□ 2.23
NUDC-202ENST00000435827 NCBP3Q53F19 620 aaKnown RBP29■■■□□ 2.23
NUDC-202ENST00000435827 PLBD2Q8NHP8 589 aa29■■■□□ 2.23
NUDC-202ENST00000435827 NLRP3Q96P20 1036 aa29■■■□□ 2.23
NUDC-202ENST00000435827 CRAMP1Q96RY5 1269 aa29■■■□□ 2.23
NUDC-202ENST00000435827 MRS2Q9HD23 443 aa29■■■□□ 2.23
NUDC-202ENST00000435827 CC2D2BQ6DHV5 1058 aa28.99■■■□□ 2.23
NUDC-202ENST00000435827 ANKRD13DQ6ZTN6 518 aa28.99■■■□□ 2.23
NUDC-202ENST00000435827 POTECB2RU33 542 aa28.98■■■□□ 2.23
NUDC-202ENST00000435827 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
NUDC-202ENST00000435827 OLFM4Q6UX06 510 aa28.97■■■□□ 2.23
NUDC-202ENST00000435827 C3orf67Q6ZVT6 689 aa28.96■■■□□ 2.23
NUDC-202ENST00000435827 KLRG1Q96E93 195 aa28.96■■■□□ 2.23
NUDC-202ENST00000435827 CHMP4AQ9BY43 222 aa28.96■■■□□ 2.23
NUDC-202ENST00000435827 SNED1Q8TER0 1413 aa28.95■■■□□ 2.23
NUDC-202ENST00000435827 GRIPAP1Q4V328 841 aa28.95■■■□□ 2.22
NUDC-202ENST00000435827 WWC1Q8IX03 1113 aa28.94■■■□□ 2.22
NUDC-202ENST00000435827 C8orf58Q8NAV2 365 aa28.94■■■□□ 2.22
NUDC-202ENST00000435827 PSMD1Q99460 953 aa28.94■■■□□ 2.22
NUDC-202ENST00000435827 ISCA1Q9BUE6 129 aa28.94■■■□□ 2.22
NUDC-202ENST00000435827 TRMT112Q9UI30 125 aaKnown RBP28.94■■■□□ 2.22
NUDC-202ENST00000435827 SCN4AP35499 1836 aa28.94■■■□□ 2.22
NUDC-202ENST00000435827 ELL2O00472 640 aaPredicted RBP28.93■■■□□ 2.22
NUDC-202ENST00000435827 ANKRD36CQ5JPF3 1778 aa28.93■■■□□ 2.22
NUDC-202ENST00000435827 SH3TC1Q8TE82 1336 aa28.93■■■□□ 2.22
NUDC-202ENST00000435827 DDNO94850 711 aaPredicted RBP28.92■■■□□ 2.22
NUDC-202ENST00000435827 HTRA3P83110 453 aa28.92■■■□□ 2.22
NUDC-202ENST00000435827 SYNE4Q8N205 404 aa28.92■■■□□ 2.22
NUDC-202ENST00000435827 ZNF277Q9NRM2 450 aaPredicted RBP28.92■■■□□ 2.22
NUDC-202ENST00000435827 IQCA1LA6NCM1 817 aa28.91■■■□□ 2.22
NUDC-202ENST00000435827 TRIM28Q13263 835 aaKnown RBP28.91■■■□□ 2.22
NUDC-202ENST00000435827 IFFO2Q5TF58 517 aa28.91■■■□□ 2.22
NUDC-202ENST00000435827 IL16Q14005 1332 aa28.91■■■□□ 2.22
NUDC-202ENST00000435827 PPEF1O14829 653 aaPredicted RBP28.9■■■□□ 2.22
NUDC-202ENST00000435827 HCLS1P14317 486 aaPredicted RBP28.89■■■□□ 2.22
NUDC-202ENST00000435827 IARSP41252 1262 aaKnown RBP28.89■■■□□ 2.22
NUDC-202ENST00000435827 CCDC30Q5VVM6 783 aa28.89■■■□□ 2.22
NUDC-202ENST00000435827 JMYQ8N9B5 988 aa28.89■■■□□ 2.22
NUDC-202ENST00000435827 L3MBTL3Q96JM7 780 aaPredicted RBP28.89■■■□□ 2.22
NUDC-202ENST00000435827 PHAXQ9H814 394 aaKnown RBP28.88■■■□□ 2.21
NUDC-202ENST00000435827 GOLGA2Q08379 1002 aa28.87■■■□□ 2.21
NUDC-202ENST00000435827 RIC3Q7Z5B4 369 aa28.87■■■□□ 2.21
NUDC-202ENST00000435827 TSPYL6Q8N831 410 aa28.87■■■□□ 2.21
NUDC-202ENST00000435827 ATP5J2-PTCD1G3V325 749 aa28.86■■■□□ 2.21
NUDC-202ENST00000435827 TSR2Q969E8 191 aaKnown RBP28.86■■■□□ 2.21
NUDC-202ENST00000435827 ATP6V0A2Q9Y487 856 aa28.86■■■□□ 2.21
NUDC-202ENST00000435827 ABCC4O15439 1325 aa28.86■■■□□ 2.21
NUDC-202ENST00000435827 BBOX1O75936 387 aa28.85■■■□□ 2.21
NUDC-202ENST00000435827 CHADLQ6NUI6 762 aa28.85■■■□□ 2.21
NUDC-202ENST00000435827 FZD9O00144 591 aa28.84■■■□□ 2.21
NUDC-202ENST00000435827 TMX4Q9H1E5 349 aaPredicted RBP28.84■■■□□ 2.21
NUDC-202ENST00000435827 DDX46Q7L014 1031 aaKnown RBP28.83■■■□□ 2.21
NUDC-202ENST00000435827 FAM89AQ96GI7 184 aa28.83■■■□□ 2.21
NUDC-202ENST00000435827 TCERG1O14776 1098 aaKnown RBP28.82■■■□□ 2.2
NUDC-202ENST00000435827 WDR63Q8IWG1 891 aa28.82■■■□□ 2.2
NUDC-202ENST00000435827 JDP2Q8WYK2 163 aa28.82■■■□□ 2.2
NUDC-202ENST00000435827 ZNF541Q9H0D2 1346 aa28.82■■■□□ 2.2
NUDC-202ENST00000435827 DDX58O95786 925 aaKnown RBP28.81■■■□□ 2.2
NUDC-202ENST00000435827 GRAPQ13588 217 aa28.81■■■□□ 2.2
NUDC-202ENST00000435827 SF3B3Q15393 1217 aaKnown RBP28.81■■■□□ 2.2
NUDC-202ENST00000435827 SP8Q8IXZ3 490 aa28.81■■■□□ 2.2
NUDC-202ENST00000435827 GRAPLQ8TC17 118 aaPredicted RBP28.81■■■□□ 2.2
NUDC-202ENST00000435827 SLC51AQ86UW1 340 aa28.8■■■□□ 2.2
NUDC-202ENST00000435827 LDHDQ86WU2 507 aa28.8■■■□□ 2.2
NUDC-202ENST00000435827 VPS33BQ9H267 617 aa28.8■■■□□ 2.2
NUDC-202ENST00000435827 TAF1DQ9H5J8 278 aaPredicted RBP28.8■■■□□ 2.2
NUDC-202ENST00000435827 LAMB2P55268 1798 aa28.8■■■□□ 2.2
NUDC-202ENST00000435827 TWISTNBQ3B726 338 aaPredicted RBP28.79■■■□□ 2.2
NUDC-202ENST00000435827 ZNF428Q96B54 188 aa28.79■■■□□ 2.2
NUDC-202ENST00000435827 HACL1Q9UJ83 578 aa28.79■■■□□ 2.2
NUDC-202ENST00000435827 POTEIP0CG38 1075 aa28.78■■■□□ 2.2
NUDC-202ENST00000435827 POTEJP0CG39 1038 aa28.78■■■□□ 2.2
NUDC-202ENST00000435827 TMC4Q7Z404 712 aa28.78■■■□□ 2.2
NUDC-202ENST00000435827 GPC2Q8N158 579 aa28.78■■■□□ 2.2
NUDC-202ENST00000435827 ZBTB38Q8NAP3 1195 aaPredicted RBP28.78■■■□□ 2.2
NUDC-202ENST00000435827 CCDC191Q8NCU4 936 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms