RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NPHP3Q7Z494 1330 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 SGSM2O43147 1006 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 PTH1RQ03431 593 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 GOLGA8FQ08AF8 430 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 GOLGA8DPQ0D2H9 430 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 ST3GAL1Q11201 340 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 LEKR1Q6ZMV7 388 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 VPS18Q9P253 973 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 SFPQP23246 707 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 FAM193AP78312 1265 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 ISM2Q6H9L7 571 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 C14orf93Q9H972 538 aaKnown RBP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 ZRANB1Q9UGI0 708 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 BIN1O00499 593 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 FBXO18Q8NFZ0 1043 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 DUOX2Q9NRD8 1548 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 ARHGEF40Q8TER5 1519 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 RAB11FIP3O75154 756 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 GEMIN8Q9NWZ8 242 aaKnown RBP8.71□□□□□ -1.01
CPSF6-202ENST00000435070 G3V3G9 751 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 NRDCO43847 1150 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 TBC1D8O95759 1140 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 GNAI3P08754 354 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 CHRM1P11229 460 aaPredicted RBP8.71□□□□□ -1.01
CPSF6-202ENST00000435070 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.01
CPSF6-202ENST00000435070 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.01
CPSF6-202ENST00000435070 KNDC1Q76NI1 1749 aa8.71□□□□□ -1.01
CPSF6-202ENST00000435070 MRFAP1L1Q96HT8 127 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 DEF6Q9H4E7 631 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 IFNKQ9P0W0 207 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 KIF2AO00139 706 aaPredicted RBP8.71□□□□□ -1.02
CPSF6-202ENST00000435070 LMOD3Q0VAK6 560 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 KLHL34Q8N239 644 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 CLTCL1P53675 1640 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 A0A1B0GUL7 405 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 LSG1Q9H089 658 aaKnown RBP8.71□□□□□ -1.02
CPSF6-202ENST00000435070 NSD2O96028 1365 aa8.71□□□□□ -1.02
CPSF6-202ENST00000435070 ARFGAP3Q9NP61 516 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 H3BQV1 296 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
CPSF6-202ENST00000435070 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 GOLGA5Q8TBA6 731 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 NCAPGQ9BPX3 1015 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 FAM135BQ49AJ0 1406 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 JAK2O60674 1132 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
CPSF6-202ENST00000435070 XPO4Q9C0E2 1151 aaKnown RBP8.7□□□□□ -1.02
CPSF6-202ENST00000435070 H3BQF6 201 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 GGT6Q6P531 493 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 ACTN2P35609 894 aa8.7□□□□□ -1.02
CPSF6-202ENST00000435070 CC2D1AQ6P1N0 951 aaPredicted RBP8.7□□□□□ -1.02
CPSF6-202ENST00000435070 STX1AQ16623 288 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 ARMCX5Q6P1M9 558 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 CCAR1Q8IX12 1150 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 ATG3Q9NT62 314 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 CTR9Q6PD62 1173 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 BANK1Q8NDB2 785 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 YY1AP1Q9H869 796 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 KINO60870 393 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 UTP14AQ9BVJ6 771 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 NEFHP12036 1026 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 CCDC93Q567U6 631 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 SALL3Q9BXA9 1300 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 PPRC1Q5VV67 1664 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 EIF3CLB5ME19 914 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 TADA3O75528 432 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 ZKSCAN1P17029 563 aaPredicted RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 CDC25BP30305 580 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 ZSCAN31Q96LW9 406 aaPredicted RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 EIF3CQ99613 913 aaKnown RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 PDE11AQ9HCR9 933 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
CPSF6-202ENST00000435070 PPP6R1Q9UPN7 881 aa8.69□□□□□ -1.02
CPSF6-202ENST00000435070 PDCP20941 246 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 GUCY1B3Q02153 619 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 HSP90AA4PQ58FG1 418 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 CEP57L1Q8IYX8 460 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 CNTROBQ8N137 903 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 SIL1Q9H173 461 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 CT47A1Q5JQC4 288 aaPredicted RBP8.68□□□□□ -1.02
CPSF6-202ENST00000435070 SULT6B1Q6IMI4 303 aa8.68□□□□□ -1.02
CPSF6-202ENST00000435070 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms