RNA–Protein interactions for RNA: ENST00000434944.1

LINC00475-206, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-206ENST00000434944 SOX10P56693 466 aa13.12□□□□□ -0.31
LINC00475-206ENST00000434944 HLFQ16534 295 aa13.12□□□□□ -0.31
LINC00475-206ENST00000434944 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
LINC00475-206ENST00000434944 LARGE2Q8N3Y3 721 aa13.12□□□□□ -0.31
LINC00475-206ENST00000434944 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
LINC00475-206ENST00000434944 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
LINC00475-206ENST00000434944 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
LINC00475-206ENST00000434944 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
LINC00475-206ENST00000434944 CA12O43570 354 aa13.11□□□□□ -0.31
LINC00475-206ENST00000434944 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
LINC00475-206ENST00000434944 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
LINC00475-206ENST00000434944 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
LINC00475-206ENST00000434944 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
LINC00475-206ENST00000434944 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
LINC00475-206ENST00000434944 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
LINC00475-206ENST00000434944 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
LINC00475-206ENST00000434944 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
LINC00475-206ENST00000434944 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
LINC00475-206ENST00000434944 ZNF408Q9H9D4 720 aa13.1□□□□□ -0.31
LINC00475-206ENST00000434944 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
LINC00475-206ENST00000434944 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
LINC00475-206ENST00000434944 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
LINC00475-206ENST00000434944 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
LINC00475-206ENST00000434944 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
LINC00475-206ENST00000434944 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
LINC00475-206ENST00000434944 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
LINC00475-206ENST00000434944 DLK2Q6UY11 383 aa13.08□□□□□ -0.32
LINC00475-206ENST00000434944 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
LINC00475-206ENST00000434944 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
LINC00475-206ENST00000434944 NUP98P52948 1817 aa13.08□□□□□ -0.32
LINC00475-206ENST00000434944 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
LINC00475-206ENST00000434944 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00475-206ENST00000434944 AOC3Q16853 763 aa13.07□□□□□ -0.32
LINC00475-206ENST00000434944 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
LINC00475-206ENST00000434944 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
LINC00475-206ENST00000434944 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
LINC00475-206ENST00000434944 GMPSP49915 693 aaPredicted RBP13.06□□□□□ -0.32
LINC00475-206ENST00000434944 CXCL9Q07325 125 aa13.06□□□□□ -0.32
LINC00475-206ENST00000434944 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
LINC00475-206ENST00000434944 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
LINC00475-206ENST00000434944 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
LINC00475-206ENST00000434944 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
LINC00475-206ENST00000434944 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
LINC00475-206ENST00000434944 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
LINC00475-206ENST00000434944 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 AKAP11Q9UKA4 1901 aa13.05□□□□□ -0.32
LINC00475-206ENST00000434944 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
LINC00475-206ENST00000434944 HUNKP57058 714 aa13.04□□□□□ -0.32
LINC00475-206ENST00000434944 NOGQ13253 232 aa13.04□□□□□ -0.32
LINC00475-206ENST00000434944 PRPF38BQ5VTL8 546 aaKnown RBP13.04□□□□□ -0.32
LINC00475-206ENST00000434944 RGL2O15211 777 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 GPTP24298 496 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
LINC00475-206ENST00000434944 MCM10Q7L590 875 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 RIC1Q4ADV7 1423 aa13.03□□□□□ -0.32
LINC00475-206ENST00000434944 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
LINC00475-206ENST00000434944 RAD17O75943 681 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 SUSD4Q5VX71 490 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
LINC00475-206ENST00000434944 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
LINC00475-206ENST00000434944 TRPA1O75762 1119 aa13.01□□□□□ -0.33
LINC00475-206ENST00000434944 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
LINC00475-206ENST00000434944 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
LINC00475-206ENST00000434944 RNF186Q9NXI6 227 aa13.01□□□□□ -0.33
LINC00475-206ENST00000434944 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
LINC00475-206ENST00000434944 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
LINC00475-206ENST00000434944 RGMBQ6NW40 437 aa13□□□□□ -0.33
LINC00475-206ENST00000434944 ZC3H15Q8WU90 426 aaKnown RBP13□□□□□ -0.33
LINC00475-206ENST00000434944 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
LINC00475-206ENST00000434944 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
LINC00475-206ENST00000434944 TAF1P21675 1872 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
LINC00475-206ENST00000434944 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
LINC00475-206ENST00000434944 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
LINC00475-206ENST00000434944 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
LINC00475-206ENST00000434944 NTSR2O95665 410 aa12.98□□□□□ -0.33
LINC00475-206ENST00000434944 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
LINC00475-206ENST00000434944 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
LINC00475-206ENST00000434944 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
LINC00475-206ENST00000434944 SAGE1Q9NXZ1 904 aa12.98□□□□□ -0.33
LINC00475-206ENST00000434944 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms