RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 MAPK8P45983 427 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 EIF1AXP47813 144 aaKnown RBP10.96□□□□□ -0.65
PTPRK-212ENST00000434424 EPHA4P54764 986 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.65
PTPRK-212ENST00000434424 PLA2G4EQ3MJ16 856 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 NUCKS1Q9H1E3 243 aaKnown RBP10.96□□□□□ -0.65
PTPRK-212ENST00000434424 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 PRPF40AO75400 957 aaKnown RBP10.95□□□□□ -0.66
PTPRK-212ENST00000434424 F11P03951 625 aa10.95□□□□□ -0.66
PTPRK-212ENST00000434424 MX2P20592 715 aa10.95□□□□□ -0.66
PTPRK-212ENST00000434424 DSC3Q14574 896 aa10.95□□□□□ -0.66
PTPRK-212ENST00000434424 STIM2Q9P246 746 aa10.95□□□□□ -0.66
PTPRK-212ENST00000434424 HRH3Q9Y5N1 445 aa10.95□□□□□ -0.66
PTPRK-212ENST00000434424 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
PTPRK-212ENST00000434424 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 NEDD1Q8NHV4 660 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 PARP2Q9UGN5 583 aa10.94□□□□□ -0.66
PTPRK-212ENST00000434424 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 FZD6O60353 706 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 GNRH1P01148 92 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 CENPCQ03188 943 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 EHHADHQ08426 723 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 STAG2Q8N3U4 1231 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 BEND7Q8N7W2 519 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-212ENST00000434424 TMEM87AQ8NBN3 555 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 ETNK1Q9HBU6 452 aa10.93□□□□□ -0.66
PTPRK-212ENST00000434424 OIP5O43482 229 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 UBAP2LQ14157 1087 aaKnown RBP10.92□□□□□ -0.66
PTPRK-212ENST00000434424 ESCO1Q5FWF5 840 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 COX20Q5RI15 118 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 DUSP9Q99956 384 aaKnown RBP10.92□□□□□ -0.66
PTPRK-212ENST00000434424 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
PTPRK-212ENST00000434424 SORBS3O60504 671 aa10.91□□□□□ -0.66
PTPRK-212ENST00000434424 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
PTPRK-212ENST00000434424 SLC9A9Q8IVB4 645 aa10.91□□□□□ -0.66
PTPRK-212ENST00000434424 C2orf49Q9BVC5 232 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-212ENST00000434424 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-212ENST00000434424 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 TNFRSF10BO14763 440 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 PHKA2P46019 1235 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 TBCELQ5QJ74 424 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-212ENST00000434424 TMC4Q7Z404 712 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 FAM161BQ96MY7 647 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 FAM129BQ96TA1 746 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 SPOCK3Q9BQ16 436 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 GPAMQ9HCL2 828 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 SCHIP1Q9P0W5 487 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-212ENST00000434424 CHMP3Q9Y3E7 222 aa10.9□□□□□ -0.66
PTPRK-212ENST00000434424 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.67
PTPRK-212ENST00000434424 A6NJY4 79 aa10.89□□□□□ -0.67
PTPRK-212ENST00000434424 CANXP27824 592 aaKnown RBP10.89□□□□□ -0.67
PTPRK-212ENST00000434424 SNRPNP63162 240 aaKnown RBP10.89□□□□□ -0.67
PTPRK-212ENST00000434424 PSMD2Q13200 908 aa10.89□□□□□ -0.67
PTPRK-212ENST00000434424 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
PTPRK-212ENST00000434424 CFHR5Q9BXR6 569 aa10.89□□□□□ -0.67
PTPRK-212ENST00000434424 OXCT2Q9BYC2 517 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-212ENST00000434424 MSTNO14793 375 aa10.88□□□□□ -0.67
PTPRK-212ENST00000434424 PROCP04070 461 aa10.88□□□□□ -0.67
PTPRK-212ENST00000434424 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
PTPRK-212ENST00000434424 PSMA6P60900 246 aaKnown RBP10.88□□□□□ -0.67
PTPRK-212ENST00000434424 DAB2P98082 770 aa10.88□□□□□ -0.67
PTPRK-212ENST00000434424 PODNQ7Z5L7 613 aa10.88□□□□□ -0.67
PTPRK-212ENST00000434424 ALKBH8Q96BT7 664 aaKnown RBP10.88□□□□□ -0.67
PTPRK-212ENST00000434424 VTI1BQ9UEU0 232 aa10.88□□□□□ -0.67
PTPRK-212ENST00000434424 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-212ENST00000434424 SHISA8B8ZZ34 492 aa10.87□□□□□ -0.67
PTPRK-212ENST00000434424 GPR182O15218 404 aa10.87□□□□□ -0.67
PTPRK-212ENST00000434424 IGHA2P01877 340 aa10.87□□□□□ -0.67
PTPRK-212ENST00000434424 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
PTPRK-212ENST00000434424 SMTNP53814 917 aa10.87□□□□□ -0.67
PTPRK-212ENST00000434424 NT5DC4Q86YG4 428 aa10.87□□□□□ -0.67
PTPRK-212ENST00000434424 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-212ENST00000434424 METTL5Q9NRN9 209 aaKnown RBP10.87□□□□□ -0.67
PTPRK-212ENST00000434424 NSFL1CQ9UNZ2 370 aaKnown RBP10.87□□□□□ -0.67
PTPRK-212ENST00000434424 A0A1B0GTH6 734 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 MAP2K3P46734 347 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 RAD51AP2Q09MP3 1159 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 MTFR1Q15390 333 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 RNF34Q969K3 372 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 KLRG1Q96E93 195 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 MYO19Q96H55 970 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 NIF3L1Q9GZT8 377 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
PTPRK-212ENST00000434424 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
PTPRK-212ENST00000434424 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
PTPRK-212ENST00000434424 LRFN2Q9ULH4 789 aa10.85□□□□□ -0.67
PTPRK-212ENST00000434424 ADAM23O75077 832 aa10.84□□□□□ -0.67
PTPRK-212ENST00000434424 ALG1LQ6GMV1 187 aa10.84□□□□□ -0.67
PTPRK-212ENST00000434424 RUBCNLQ9H714 662 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms