RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 TAF1LQ8IZX4 1826 aa13.07□□□□□ -0.32
NEFM-202ENST00000433454 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 GPTP24298 496 aa13.06□□□□□ -0.32
NEFM-202ENST00000433454 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 RC3H1Q5TC82 1133 aaKnown RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
NEFM-202ENST00000433454 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
NEFM-202ENST00000433454 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
NEFM-202ENST00000433454 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
NEFM-202ENST00000433454 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
NEFM-202ENST00000433454 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
NEFM-202ENST00000433454 RXRBP28702 533 aa13.05□□□□□ -0.32
NEFM-202ENST00000433454 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
NEFM-202ENST00000433454 FOXO4P98177 505 aa13.05□□□□□ -0.32
NEFM-202ENST00000433454 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
NEFM-202ENST00000433454 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEFM-202ENST00000433454 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 SCN7AQ01118 1682 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
NEFM-202ENST00000433454 GNPATO15228 680 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 TRIM37O94972 964 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 MX1P20591 662 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 PDE1AP54750 535 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
NEFM-202ENST00000433454 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
NEFM-202ENST00000433454 RGL2O15211 777 aa13.02□□□□□ -0.32
NEFM-202ENST00000433454 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.32
NEFM-202ENST00000433454 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
NEFM-202ENST00000433454 SIL1Q9H173 461 aa13.02□□□□□ -0.32
NEFM-202ENST00000433454 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
NEFM-202ENST00000433454 PTPN12Q05209 780 aaKnown RBP13.02□□□□□ -0.33
NEFM-202ENST00000433454 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.33
NEFM-202ENST00000433454 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.33
NEFM-202ENST00000433454 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
NEFM-202ENST00000433454 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
NEFM-202ENST00000433454 MYH3P11055 1940 aa13.01□□□□□ -0.33
NEFM-202ENST00000433454 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
NEFM-202ENST00000433454 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
NEFM-202ENST00000433454 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEFM-202ENST00000433454 AOX1Q06278 1338 aa13.01□□□□□ -0.33
NEFM-202ENST00000433454 AK7Q96M32 723 aa13□□□□□ -0.33
NEFM-202ENST00000433454 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
NEFM-202ENST00000433454 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
NEFM-202ENST00000433454 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
NEFM-202ENST00000433454 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
NEFM-202ENST00000433454 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
NEFM-202ENST00000433454 SASH1O94885 1247 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
NEFM-202ENST00000433454 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
NEFM-202ENST00000433454 RGS17Q9UGC6 210 aaPredicted RBP12.99□□□□□ -0.33
NEFM-202ENST00000433454 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
NEFM-202ENST00000433454 CTSWP56202 376 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 CCDC57Q2TAC2 916 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
NEFM-202ENST00000433454 ZPR1O75312 459 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 CDC45O75419 566 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 CSF1RP07333 972 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
NEFM-202ENST00000433454 HSP90B1P14625 803 aaKnown RBP12.98□□□□□ -0.33
NEFM-202ENST00000433454 LAMB2P55268 1798 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 PDE8AO60658 829 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 SEC24BO95487 1268 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 SDSP20132 328 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 AACSQ86V21 672 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
NEFM-202ENST00000433454 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
NEFM-202ENST00000433454 NTSR2O95665 410 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 ADRA2BP18089 450 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
NEFM-202ENST00000433454 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 CIAO1O76071 339 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 TBC1D9Q6ZT07 1266 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
NEFM-202ENST00000433454 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
NEFM-202ENST00000433454 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
NEFM-202ENST00000433454 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
NEFM-202ENST00000433454 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms