RNA–Protein interactions for RNA: ENST00000432597.3

SYCE1-204, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-204ENST00000432597 C8orf58Q8NAV2 365 aa30.01■■■□□ 2.39
SYCE1-204ENST00000432597 C7orf43Q8WVR3 580 aa30.01■■■□□ 2.39
SYCE1-204ENST00000432597 HYPKQ9NX55 129 aa30.01■■■□□ 2.39
SYCE1-204ENST00000432597 ZC3H4Q9UPT8 1303 aaKnown RBP30■■■□□ 2.39
SYCE1-204ENST00000432597 PLBD2Q8NHP8 589 aa30■■■□□ 2.39
SYCE1-204ENST00000432597 KDM2BQ8NHM5 1336 aa29.99■■■□□ 2.39
SYCE1-204ENST00000432597 CCDC93Q567U6 631 aa29.99■■■□□ 2.39
SYCE1-204ENST00000432597 ANKRD13DQ6ZTN6 518 aa29.99■■■□□ 2.39
SYCE1-204ENST00000432597 NLRP10Q86W26 655 aa29.99■■■□□ 2.39
SYCE1-204ENST00000432597 RPGRQ92834 1020 aaKnown RBP29.99■■■□□ 2.39
SYCE1-204ENST00000432597 TSR2Q969E8 191 aaKnown RBP29.99■■■□□ 2.39
SYCE1-204ENST00000432597 LTBP3Q9NS15 1303 aa29.98■■■□□ 2.39
SYCE1-204ENST00000432597 TIAM2Q8IVF5 1701 aa29.98■■■□□ 2.39
SYCE1-204ENST00000432597 C3orf67Q6ZVT6 689 aa29.97■■■□□ 2.39
SYCE1-204ENST00000432597 NCBP3Q53F19 620 aaKnown RBP29.96■■■□□ 2.39
SYCE1-204ENST00000432597 OLFM4Q6UX06 510 aa29.96■■■□□ 2.39
SYCE1-204ENST00000432597 FAM9BQ8IZU0 186 aa29.96■■■□□ 2.39
SYCE1-204ENST00000432597 SALL2Q9Y467 1007 aaPredicted RBP29.96■■■□□ 2.39
SYCE1-204ENST00000432597 RNF123Q5XPI4 1314 aa29.96■■■□□ 2.39
SYCE1-204ENST00000432597 TSPYL6Q8N831 410 aa29.95■■■□□ 2.39
SYCE1-204ENST00000432597 NLRP3Q96P20 1036 aa29.95■■■□□ 2.39
SYCE1-204ENST00000432597 HOXA10P31260 410 aaPredicted RBP29.94■■■□□ 2.38
SYCE1-204ENST00000432597 SLC10A5Q5PT55 438 aa29.94■■■□□ 2.38
SYCE1-204ENST00000432597 ZNF428Q96B54 188 aa29.94■■■□□ 2.38
SYCE1-204ENST00000432597 RBM17Q96I25 401 aaKnown RBP29.94■■■□□ 2.38
SYCE1-204ENST00000432597 PHAXQ9H814 394 aaKnown RBP29.94■■■□□ 2.38
SYCE1-204ENST00000432597 TRMT112Q9UI30 125 aaKnown RBP29.94■■■□□ 2.38
SYCE1-204ENST00000432597 IL16Q14005 1332 aa29.93■■■□□ 2.38
SYCE1-204ENST00000432597 DICER1Q9UPY3 1922 aaKnown RBP29.92■■■□□ 2.38
SYCE1-204ENST00000432597 CCDC30Q5VVM6 783 aa29.92■■■□□ 2.38
SYCE1-204ENST00000432597 RRAGCQ9HB90 399 aa29.92■■■□□ 2.38
SYCE1-204ENST00000432597 GLTPD2A6NH11 291 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 ATP5J2-PTCD1G3V325 749 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 FKBP4Q02790 459 aaKnown RBP eCLIP29.91■■■□□ 2.38
SYCE1-204ENST00000432597 GOLGA2Q08379 1002 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 RTKN2Q8IZC4 609 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 SYNE4Q8N205 404 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 CHMP4AQ9BY43 222 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 SH3TC1Q8TE82 1336 aa29.91■■■□□ 2.38
SYCE1-204ENST00000432597 TOMM70O94826 608 aa29.9■■■□□ 2.38
SYCE1-204ENST00000432597 HCLS1P14317 486 aaPredicted RBP29.9■■■□□ 2.38
SYCE1-204ENST00000432597 RIC3Q7Z5B4 369 aa29.9■■■□□ 2.38
SYCE1-204ENST00000432597 CRAMP1Q96RY5 1269 aa29.9■■■□□ 2.38
SYCE1-204ENST00000432597 ISCA1Q9BUE6 129 aa29.9■■■□□ 2.38
SYCE1-204ENST00000432597 C16orf71Q8IYS4 520 aaPredicted RBP29.88■■■□□ 2.37
SYCE1-204ENST00000432597 PPEF1O14829 653 aaPredicted RBP29.87■■■□□ 2.37
SYCE1-204ENST00000432597 DPY19L2Q6NUT2 758 aa29.87■■■□□ 2.37
SYCE1-204ENST00000432597 WDR63Q8IWG1 891 aa29.87■■■□□ 2.37
SYCE1-204ENST00000432597 ZNF277Q9NRM2 450 aaPredicted RBP29.87■■■□□ 2.37
SYCE1-204ENST00000432597 TCERG1O14776 1098 aaKnown RBP29.86■■■□□ 2.37
SYCE1-204ENST00000432597 TWISTNBQ3B726 338 aaPredicted RBP29.86■■■□□ 2.37
SYCE1-204ENST00000432597 LAMB2P55268 1798 aa29.85■■■□□ 2.37
SYCE1-204ENST00000432597 CC2D2BQ6DHV5 1058 aa29.85■■■□□ 2.37
SYCE1-204ENST00000432597 FANCIQ9NVI1 1328 aa29.85■■■□□ 2.37
SYCE1-204ENST00000432597 FAM89AQ96GI7 184 aa29.84■■■□□ 2.37
SYCE1-204ENST00000432597 ABCC4O15439 1325 aa29.84■■■□□ 2.37
SYCE1-204ENST00000432597 SNED1Q8TER0 1413 aa29.84■■■□□ 2.37
SYCE1-204ENST00000432597 DDX58O95786 925 aaKnown RBP29.83■■■□□ 2.37
SYCE1-204ENST00000432597 TRIM28Q13263 835 aaKnown RBP29.83■■■□□ 2.37
SYCE1-204ENST00000432597 SLC51AQ86UW1 340 aa29.83■■■□□ 2.37
SYCE1-204ENST00000432597 MYD88Q99836 296 aa29.83■■■□□ 2.37
SYCE1-204ENST00000432597 STK31Q9BXU1 1019 aa29.83■■■□□ 2.37
SYCE1-204ENST00000432597 HSPA6P17066 643 aa29.82■■■□□ 2.36
SYCE1-204ENST00000432597 RBM46Q8TBY0 533 aaKnown RBP29.82■■■□□ 2.36
SYCE1-204ENST00000432597 PSMD1Q99460 953 aa29.82■■■□□ 2.36
SYCE1-204ENST00000432597 VEGFAP15692 232 aaPredicted RBP29.81■■■□□ 2.36
SYCE1-204ENST00000432597 IARSP41252 1262 aaKnown RBP29.81■■■□□ 2.36
SYCE1-204ENST00000432597 RTL5Q5HYW3 569 aaPredicted RBP29.81■■■□□ 2.36
SYCE1-204ENST00000432597 DDX60Q8IY21 1712 aaKnown RBP29.8■■■□□ 2.36
SYCE1-204ENST00000432597 DDX46Q7L014 1031 aaKnown RBP29.8■■■□□ 2.36
SYCE1-204ENST00000432597 GRIPAP1Q4V328 841 aa29.79■■■□□ 2.36
SYCE1-204ENST00000432597 TMX4Q9H1E5 349 aaPredicted RBP29.79■■■□□ 2.36
SYCE1-204ENST00000432597 WDR90Q96KV7 1748 aa29.79■■■□□ 2.36
SYCE1-204ENST00000432597 DDNO94850 711 aaPredicted RBP29.78■■■□□ 2.36
SYCE1-204ENST00000432597 METTL22Q9BUU2 404 aaPredicted RBP29.78■■■□□ 2.36
SYCE1-204ENST00000432597 MAP3K2Q9Y2U5 619 aa29.78■■■□□ 2.36
SYCE1-204ENST00000432597 ATP6V0A2Q9Y487 856 aa29.78■■■□□ 2.36
SYCE1-204ENST00000432597 SPINK5Q9NQ38 1064 aaPredicted RBP29.77■■■□□ 2.36
SYCE1-204ENST00000432597 POTECB2RU33 542 aa29.76■■■□□ 2.35
SYCE1-204ENST00000432597 IRS4O14654 1257 aaPredicted RBP29.76■■■□□ 2.35
SYCE1-204ENST00000432597 BBOX1O75936 387 aa29.76■■■□□ 2.35
SYCE1-204ENST00000432597 SLC4A2P04920 1241 aa29.76■■■□□ 2.35
SYCE1-204ENST00000432597 GRAPQ13588 217 aa29.76■■■□□ 2.35
SYCE1-204ENST00000432597 ZBTB38Q8NAP3 1195 aaPredicted RBP29.76■■■□□ 2.35
SYCE1-204ENST00000432597 GRAPLQ8TC17 118 aaPredicted RBP29.76■■■□□ 2.35
SYCE1-204ENST00000432597 EXOSC9Q06265 439 aaKnown RBP29.75■■■□□ 2.35
SYCE1-204ENST00000432597 KSR2Q6VAB6 950 aa29.75■■■□□ 2.35
SYCE1-204ENST00000432597 CCDC191Q8NCU4 936 aa29.75■■■□□ 2.35
SYCE1-204ENST00000432597 PI4KAP2A4QPH2 592 aa29.74■■■□□ 2.35
SYCE1-204ENST00000432597 SF3B3Q15393 1217 aaKnown RBP29.74■■■□□ 2.35
SYCE1-204ENST00000432597 G2E3Q7L622 706 aa29.74■■■□□ 2.35
SYCE1-204ENST00000432597 PI4KAP1Q8N8J0 262 aa29.74■■■□□ 2.35
SYCE1-204ENST00000432597 CWC25Q9NXE8 425 aaPredicted RBP29.74■■■□□ 2.35
SYCE1-204ENST00000432597 ZNF541Q9H0D2 1346 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 VAMP4O75379 141 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 FSTL1Q12841 308 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 SP8Q8IXZ3 490 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 JDP2Q8WYK2 163 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 TAF1P21675 1872 aa29.73■■■□□ 2.35
SYCE1-204ENST00000432597 MYH16Q9H6N6 1097 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms