RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 SSFA2P28290 1259 aa8.16□□□□□ -1.1
LINC00390-201ENST00000432331 HNRNPH2P55795 449 aaKnown RBP8.16□□□□□ -1.1
LINC00390-201ENST00000432331 PWP2Q15269 919 aaKnown RBP8.16□□□□□ -1.1
LINC00390-201ENST00000432331 LARP1Q6PKG0 1096 aaKnown RBP8.16□□□□□ -1.1
LINC00390-201ENST00000432331 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
LINC00390-201ENST00000432331 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.16□□□□□ -1.1
LINC00390-201ENST00000432331 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 BCL9LQ86UU0 1499 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 KIF2AO00139 706 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 APAF1O14727 1248 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 IVLP07476 585 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 TDO2P48775 406 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 GSCP56915 257 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 HDAC1Q13547 482 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 ZKSCAN8Q15776 578 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 TTC31Q49AM3 519 aaPredicted RBP8.15□□□□□ -1.1
LINC00390-201ENST00000432331 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 UNC5CLQ8IV45 518 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 TCP11L2Q8N4U5 519 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 CCDC112Q8NEF3 446 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 ERO1AQ96HE7 468 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 CEP89Q96ST8 783 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 PSD3Q9NYI0 1048 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 USP21Q9UK80 565 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 JRKLQ9Y4A0 524 aa8.15□□□□□ -1.1
LINC00390-201ENST00000432331 PARP4Q9UKK3 1724 aaKnown RBP8.15□□□□□ -1.11
LINC00390-201ENST00000432331 AFF2P51816 1311 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 MYO1CO00159 1063 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 TUBB4AP04350 444 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 IL2RBP14784 551 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 LIG1P18858 919 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 USP8P40818 1118 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 TMPOP42166 694 aaKnown RBP8.14□□□□□ -1.11
LINC00390-201ENST00000432331 VPS72Q15906 364 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 NFE2L2Q16236 605 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 CT47A1Q5JQC4 288 aaPredicted RBP8.14□□□□□ -1.11
LINC00390-201ENST00000432331 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 NBPF10Q6P3W6 841 aaKnown RBP8.14□□□□□ -1.11
LINC00390-201ENST00000432331 GOLGA5Q8TBA6 731 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 AK7Q96M32 723 aa8.14□□□□□ -1.11
LINC00390-201ENST00000432331 THRAP3Q9Y2W1 955 aaKnown RBP8.14□□□□□ -1.11
LINC00390-201ENST00000432331 DISP2A7MBM2 1401 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 RGPD5Q99666 1765 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 ELP1O95163 1332 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 SPATA31A1Q5TZJ5 1347 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 SPATA31A5Q5VU36 1347 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 CCDC171Q6TFL3 1326 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 SPATA31A7Q8IWB4 1347 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 GOLIM4O00461 696 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 PPP1R12AO14974 1030 aaPredicted RBP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 IGSF3O75054 1194 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 CT47B1P0C2W7 299 aaPredicted RBP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 MAGEA9P43362 315 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 PLEKHO1Q53GL0 409 aaPredicted RBP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 BMP2KLQ5H9B9 411 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 PHACTR3Q96KR7 559 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 FAM107BQ9H098 131 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
LINC00390-201ENST00000432331 RRP7AQ9Y3A4 280 aaKnown RBP8.13□□□□□ -1.11
LINC00390-201ENST00000432331 PCDH11XQ9BZA7 1347 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 PCDH11YQ9BZA8 1340 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 SENP3-EIF4A1A0A087X0R7 540 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 SYCE3A1L190 88 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 ERICH4A6NGS2 130 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 NEMFO60524 1076 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 CPP00450 1065 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 NEUROD2Q15784 382 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
LINC00390-201ENST00000432331 SPDYE2Q495Y8 402 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 MCTP2Q6DN12 878 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 NBPF5PQ86XG9 351 aaPredicted RBP8.12□□□□□ -1.11
LINC00390-201ENST00000432331 PPM1EQ8WY54 764 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
LINC00390-201ENST00000432331 TSC1Q92574 1164 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 CXorf56Q9H5V9 222 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 ARGLU1Q9NWB6 273 aaPredicted RBP8.12□□□□□ -1.11
LINC00390-201ENST00000432331 TRPC5Q9UL62 973 aaPredicted RBP8.12□□□□□ -1.11
LINC00390-201ENST00000432331 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 ATRNO75882 1429 aa8.12□□□□□ -1.11
LINC00390-201ENST00000432331 NEFHP12036 1026 aa8.11□□□□□ -1.11
LINC00390-201ENST00000432331 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
LINC00390-201ENST00000432331 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
LINC00390-201ENST00000432331 SRLQ86TD4 932 aa8.11□□□□□ -1.11
LINC00390-201ENST00000432331 GPT2Q8TD30 523 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms