RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
RTN1-204ENST00000432103 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
RTN1-204ENST00000432103 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
RTN1-204ENST00000432103 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
RTN1-204ENST00000432103 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
RTN1-204ENST00000432103 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
RTN1-204ENST00000432103 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
RTN1-204ENST00000432103 ANKRD36CQ5JPF3 1778 aa17.05■□□□□ 0.32
RTN1-204ENST00000432103 RFC4P35249 363 aa17.05■□□□□ 0.32
RTN1-204ENST00000432103 CASP7P55210 303 aa17.05■□□□□ 0.32
RTN1-204ENST00000432103 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
RTN1-204ENST00000432103 SSFA2P28290 1259 aa17.05■□□□□ 0.32
RTN1-204ENST00000432103 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
RTN1-204ENST00000432103 RGPD3A6NKT7 1758 aaPredicted RBP17.04■□□□□ 0.32
RTN1-204ENST00000432103 RGPD4Q7Z3J3 1758 aa17.04■□□□□ 0.32
RTN1-204ENST00000432103 GPTP24298 496 aa17.04■□□□□ 0.32
RTN1-204ENST00000432103 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
RTN1-204ENST00000432103 NUP98P52948 1817 aa17.04■□□□□ 0.32
RTN1-204ENST00000432103 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
RTN1-204ENST00000432103 UTP14AQ9BVJ6 771 aaKnown RBP17.03■□□□□ 0.32
RTN1-204ENST00000432103 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
RTN1-204ENST00000432103 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
RTN1-204ENST00000432103 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
RTN1-204ENST00000432103 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
RTN1-204ENST00000432103 DEKP35659 375 aaKnown RBP17.03■□□□□ 0.32
RTN1-204ENST00000432103 RGS3P49796 1198 aa17.03■□□□□ 0.32
RTN1-204ENST00000432103 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
RTN1-204ENST00000432103 KAZALD1Q96I82 304 aa17.03■□□□□ 0.32
RTN1-204ENST00000432103 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
RTN1-204ENST00000432103 LRRCC1Q9C099 1032 aa17.02■□□□□ 0.32
RTN1-204ENST00000432103 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
RTN1-204ENST00000432103 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
RTN1-204ENST00000432103 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
RTN1-204ENST00000432103 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
RTN1-204ENST00000432103 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
RTN1-204ENST00000432103 OS9Q13438 667 aaPredicted RBP17■□□□□ 0.31
RTN1-204ENST00000432103 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
RTN1-204ENST00000432103 FAM89AQ96GI7 184 aa17■□□□□ 0.31
RTN1-204ENST00000432103 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
RTN1-204ENST00000432103 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
RTN1-204ENST00000432103 FOXO4P98177 505 aa17■□□□□ 0.31
RTN1-204ENST00000432103 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
RTN1-204ENST00000432103 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
RTN1-204ENST00000432103 PROM2Q8N271 834 aa17■□□□□ 0.31
RTN1-204ENST00000432103 SETDB2Q96T68 719 aa17■□□□□ 0.31
RTN1-204ENST00000432103 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
RTN1-204ENST00000432103 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
RTN1-204ENST00000432103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
RTN1-204ENST00000432103 SOCS7O14512 581 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
RTN1-204ENST00000432103 PDE8AO60658 829 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 PHF14O94880 888 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 BAG6P46379 1132 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
RTN1-204ENST00000432103 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
RTN1-204ENST00000432103 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
RTN1-204ENST00000432103 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
RTN1-204ENST00000432103 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
RTN1-204ENST00000432103 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
RTN1-204ENST00000432103 APBB1O00213 710 aa16.97■□□□□ 0.31
RTN1-204ENST00000432103 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
RTN1-204ENST00000432103 NTSR2O95665 410 aa16.96■□□□□ 0.31
RTN1-204ENST00000432103 CSF1RP07333 972 aa16.96■□□□□ 0.31
RTN1-204ENST00000432103 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
RTN1-204ENST00000432103 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
RTN1-204ENST00000432103 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
RTN1-204ENST00000432103 ANP32AP39687 249 aaKnown RBP16.96■□□□□ 0.3
RTN1-204ENST00000432103 CTSWP56202 376 aa16.96■□□□□ 0.3
RTN1-204ENST00000432103 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.3
RTN1-204ENST00000432103 AKT1S1Q96B36 256 aa16.96■□□□□ 0.3
RTN1-204ENST00000432103 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.3
RTN1-204ENST00000432103 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.3
RTN1-204ENST00000432103 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
RTN1-204ENST00000432103 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
RTN1-204ENST00000432103 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
RTN1-204ENST00000432103 PDE4AP27815 886 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 NBPF5PQ86XG9 351 aaPredicted RBP16.94■□□□□ 0.3
RTN1-204ENST00000432103 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
RTN1-204ENST00000432103 PTPN12Q05209 780 aaKnown RBP16.94■□□□□ 0.3
RTN1-204ENST00000432103 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 C4AP0C0L4 1744 aa16.94■□□□□ 0.3
RTN1-204ENST00000432103 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 FAM177BA6PVY3 158 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 NPHP1O15259 732 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 TTLL11Q8NHH1 800 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 CIAO1O76071 339 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms