RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 GPRC5DQ9NZD1 345 aa13.57□□□□□ -0.24
ATG4B-212ENST00000430617 BRCA2P51587 3418 aa13.57□□□□□ -0.24
ATG4B-212ENST00000430617 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
ATG4B-212ENST00000430617 TRPA1O75762 1119 aa13.56□□□□□ -0.24
ATG4B-212ENST00000430617 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
ATG4B-212ENST00000430617 ADARB2Q9NS39 739 aaKnown RBP13.56□□□□□ -0.24
ATG4B-212ENST00000430617 RNF186Q9NXI6 227 aa13.56□□□□□ -0.24
ATG4B-212ENST00000430617 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
ATG4B-212ENST00000430617 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
ATG4B-212ENST00000430617 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-212ENST00000430617 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
ATG4B-212ENST00000430617 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
ATG4B-212ENST00000430617 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
ATG4B-212ENST00000430617 SAGE1Q9NXZ1 904 aa13.55□□□□□ -0.24
ATG4B-212ENST00000430617 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
ATG4B-212ENST00000430617 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
ATG4B-212ENST00000430617 TAF1P21675 1872 aa13.55□□□□□ -0.24
ATG4B-212ENST00000430617 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
ATG4B-212ENST00000430617 IL13P35225 146 aa13.54□□□□□ -0.24
ATG4B-212ENST00000430617 HIRAP54198 1017 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-212ENST00000430617 HUNKP57058 714 aa13.54□□□□□ -0.24
ATG4B-212ENST00000430617 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
ATG4B-212ENST00000430617 HTTP42858 3142 aa13.53□□□□□ -0.24
ATG4B-212ENST00000430617 FAM177BA6PVY3 158 aa13.53□□□□□ -0.24
ATG4B-212ENST00000430617 FXR1P51114 621 aaKnown RBP eCLIP13.53□□□□□ -0.24
ATG4B-212ENST00000430617 KIF23Q02241 960 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-212ENST00000430617 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
ATG4B-212ENST00000430617 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
ATG4B-212ENST00000430617 LAMB2P55268 1798 aa13.53□□□□□ -0.24
ATG4B-212ENST00000430617 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-212ENST00000430617 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
ATG4B-212ENST00000430617 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
ATG4B-212ENST00000430617 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
ATG4B-212ENST00000430617 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
ATG4B-212ENST00000430617 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-212ENST00000430617 HMOX1P09601 288 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 CXCL9Q07325 125 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 NIM1KQ8IY84 436 aa13.5□□□□□ -0.25
ATG4B-212ENST00000430617 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-212ENST00000430617 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
ATG4B-212ENST00000430617 KIAA0100Q14667 2235 aaKnown RBP13.49□□□□□ -0.25
ATG4B-212ENST00000430617 AOC3Q16853 763 aa13.49□□□□□ -0.25
ATG4B-212ENST00000430617 MIER1Q8N108 512 aa13.49□□□□□ -0.25
ATG4B-212ENST00000430617 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
ATG4B-212ENST00000430617 PANK3Q9H999 370 aa13.49□□□□□ -0.25
ATG4B-212ENST00000430617 CEP290O15078 2479 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
ATG4B-212ENST00000430617 KCNQ3O43525 872 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
ATG4B-212ENST00000430617 ZC3H15Q8WU90 426 aaKnown RBP13.48□□□□□ -0.25
ATG4B-212ENST00000430617 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 COL6A3P12111 3177 aa13.48□□□□□ -0.25
ATG4B-212ENST00000430617 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
ATG4B-212ENST00000430617 ZNF157P51786 506 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-212ENST00000430617 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
ATG4B-212ENST00000430617 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
ATG4B-212ENST00000430617 HLFQ16534 295 aa13.46□□□□□ -0.25
ATG4B-212ENST00000430617 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
ATG4B-212ENST00000430617 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
ATG4B-212ENST00000430617 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
ATG4B-212ENST00000430617 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-212ENST00000430617 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
ATG4B-212ENST00000430617 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
ATG4B-212ENST00000430617 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
ATG4B-212ENST00000430617 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
ATG4B-212ENST00000430617 SLC10A3P09131 477 aa13.45□□□□□ -0.26
ATG4B-212ENST00000430617 HOXA10P31260 410 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-212ENST00000430617 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-212ENST00000430617 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
ATG4B-212ENST00000430617 DLL1O00548 723 aa13.44□□□□□ -0.26
ATG4B-212ENST00000430617 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 ANP32CO43423 234 aa13.44□□□□□ -0.26
ATG4B-212ENST00000430617 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 TEFQ10587 303 aa13.44□□□□□ -0.26
ATG4B-212ENST00000430617 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 ZNF296Q8WUU4 475 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 BCL2L13Q9BXK5 485 aa13.44□□□□□ -0.26
ATG4B-212ENST00000430617 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
ATG4B-212ENST00000430617 SCN9AQ15858 1988 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 ADM5C9JUS6 153 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 RAD17O75943 681 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 EGFRP00533 1210 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
ATG4B-212ENST00000430617 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms