RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
HPS4-205ENST00000429411 EP400Q96L91 3159 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 SPATA31A3Q5VYP0 1347 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 MST1RQ04912 1400 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 ADCY5O95622 1261 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 ZRSR1Q15695 479 aaKnown RBP9.6□□□□□ -0.87
HPS4-205ENST00000429411 NBPF6Q5VWK0 638 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
HPS4-205ENST00000429411 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
HPS4-205ENST00000429411 NBPF4Q96M43 638 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 KIAA0232Q92628 1395 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 ATP10DQ9P241 1426 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 BRD1O95696 1058 aa9.6□□□□□ -0.87
HPS4-205ENST00000429411 IPO4Q8TEX9 1081 aaKnown RBP9.6□□□□□ -0.87
HPS4-205ENST00000429411 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 PLEKHG3A1L390 1219 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 ZSCAN22P10073 491 aaPredicted RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 FAM227BQ96M60 508 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 ECHDC1Q9NTX5 307 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 ZKSCAN5Q9Y2L8 839 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 ZNF772Q68DY9 489 aaPredicted RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 TEX2Q8IWB9 1127 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 RAPGEF4Q8WZA2 1011 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 ACSBG1Q96GR2 724 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 PTH1RQ03431 593 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 SF3B2Q13435 895 aaKnown RBP9.59□□□□□ -0.87
HPS4-205ENST00000429411 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 GORABQ5T7V8 394 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 PPP1R9BQ96SB3 815 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 MYD88Q99836 296 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 NCOA3Q9Y6Q9 1424 aa9.59□□□□□ -0.87
HPS4-205ENST00000429411 GUCY1B3Q02153 619 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 PROSER3Q2NL68 480 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 ADCK5Q3MIX3 580 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 CCDC183Q5T5S1 534 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 RNF20Q5VTR2 975 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 RBM8AQ9Y5S9 174 aaKnown RBP9.58□□□□□ -0.88
HPS4-205ENST00000429411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.58□□□□□ -0.88
HPS4-205ENST00000429411 CPSF1Q10570 1443 aaKnown RBP9.58□□□□□ -0.88
HPS4-205ENST00000429411 SGSM2O43147 1006 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 OFD1O75665 1012 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 LARGE1O95461 756 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 DBF4Q9UBU7 674 aaPredicted RBP9.58□□□□□ -0.88
HPS4-205ENST00000429411 SBNO1A3KN83 1393 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 KCTD17Q8N5Z5 321 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 TRPC5Q9UL62 973 aaPredicted RBP9.58□□□□□ -0.88
HPS4-205ENST00000429411 TTC21AQ8NDW8 1320 aa9.58□□□□□ -0.88
HPS4-205ENST00000429411 IBTKQ9P2D0 1353 aaPredicted RBP9.57□□□□□ -0.88
HPS4-205ENST00000429411 ANAPC15P60006 121 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 USP6P35125 1406 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 F13A1P00488 732 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 HSPA4P34932 840 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 KRT85P78386 507 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 NMIQ13287 307 aaPredicted RBP9.57□□□□□ -0.88
HPS4-205ENST00000429411 SOS2Q07890 1332 aaPredicted RBP9.57□□□□□ -0.88
HPS4-205ENST00000429411 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 SPATA32Q96LK8 384 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 OSBPL3Q9H4L5 887 aa9.57□□□□□ -0.88
HPS4-205ENST00000429411 NOL7Q9UMY1 257 aaKnown RBP9.57□□□□□ -0.88
HPS4-205ENST00000429411 CYP2E1P05181 493 aaPredicted RBP9.56□□□□□ -0.88
HPS4-205ENST00000429411 DDX46Q7L014 1031 aaKnown RBP9.56□□□□□ -0.88
HPS4-205ENST00000429411 RUFY3Q7L099 469 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 RAB11FIP4Q86YS3 637 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 RGS17Q9UGC6 210 aaPredicted RBP9.56□□□□□ -0.88
HPS4-205ENST00000429411 HDAC5Q9UQL6 1122 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 SASS6Q6UVJ0 657 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 UBE3BQ7Z3V4 1068 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 FMNL2Q96PY5 1086 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 BICC1Q9H694 974 aaKnown RBP9.56□□□□□ -0.88
HPS4-205ENST00000429411 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
HPS4-205ENST00000429411 BECN2A8MW95 431 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 UBE2HP62256 183 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 INTS4Q96HW7 963 aaKnown RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 NUP62CLQ9H1M0 184 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 RAD50Q92878 1312 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 GOLGA6L19H0YKK7 550 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 CCDC192P0DO97 292 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 PSMA5P28066 241 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 CCT2P78371 535 aaKnown RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 CCDC129Q6ZRS4 1044 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 DEFB132Q7Z7B7 95 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 ERC1Q8IUD2 1116 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 STK11IPQ8N1F8 1099 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms