RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 COPRSQ9NQ92 184 aa16.52■□□□□ 0.23
THBS3-202ENST00000428962 IL2RBP14784 551 aa16.51■□□□□ 0.23
THBS3-202ENST00000428962 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
THBS3-202ENST00000428962 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
THBS3-202ENST00000428962 ARXQ96QS3 562 aa16.51■□□□□ 0.23
THBS3-202ENST00000428962 SOCS7O14512 581 aa16.5■□□□□ 0.23
THBS3-202ENST00000428962 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
THBS3-202ENST00000428962 SIL1Q9H173 461 aa16.5■□□□□ 0.23
THBS3-202ENST00000428962 ZDHHC9Q9Y397 364 aa16.5■□□□□ 0.23
THBS3-202ENST00000428962 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
THBS3-202ENST00000428962 BRD1O95696 1058 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
THBS3-202ENST00000428962 NUP188Q5SRE5 1749 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 A0A087WZG4 1122 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
THBS3-202ENST00000428962 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
THBS3-202ENST00000428962 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
THBS3-202ENST00000428962 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
THBS3-202ENST00000428962 LMBRD1Q9NUN5 540 aa16.49■□□□□ 0.23
THBS3-202ENST00000428962 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 KCNB2Q92953 911 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 TTC14Q96N46 770 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 TM6SF1Q9BZW5 370 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
THBS3-202ENST00000428962 RFX7Q2KHR2 1363 aa16.47■□□□□ 0.23
THBS3-202ENST00000428962 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
THBS3-202ENST00000428962 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
THBS3-202ENST00000428962 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
THBS3-202ENST00000428962 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
THBS3-202ENST00000428962 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
THBS3-202ENST00000428962 LRP6O75581 1613 aa16.47■□□□□ 0.23
THBS3-202ENST00000428962 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
THBS3-202ENST00000428962 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
THBS3-202ENST00000428962 WDR33Q9C0J8 1336 aaKnown RBP16.46■□□□□ 0.23
THBS3-202ENST00000428962 AK2P54819 239 aa16.46■□□□□ 0.23
THBS3-202ENST00000428962 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.23
THBS3-202ENST00000428962 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
THBS3-202ENST00000428962 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 MBD3O95983 291 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 CASP7P55210 303 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 EVA1CP58658 441 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 VPS53Q5VIR6 699 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 KLHDC4Q8TBB5 520 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 H7C1W4 665 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 ATP5JP18859 108 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 KCNJ4P48050 445 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 ZNF445P59923 1031 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 PTH1RQ03431 593 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 NBPF14Q5TI25 921 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 POTEAQ6S8J7 498 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 CYP46A1Q9Y6A2 500 aa16.45■□□□□ 0.22
THBS3-202ENST00000428962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
THBS3-202ENST00000428962 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
THBS3-202ENST00000428962 NECTIN1Q15223 517 aa16.44■□□□□ 0.22
THBS3-202ENST00000428962 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
THBS3-202ENST00000428962 PANK2Q9BZ23 570 aa16.44■□□□□ 0.22
THBS3-202ENST00000428962 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
THBS3-202ENST00000428962 TJP1Q07157 1748 aa16.44■□□□□ 0.22
THBS3-202ENST00000428962 MED23Q9ULK4 1368 aa16.44■□□□□ 0.22
THBS3-202ENST00000428962 PSMA5P28066 241 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 TFCP2Q12800 502 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
THBS3-202ENST00000428962 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
THBS3-202ENST00000428962 MAP4K1Q92918 833 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
THBS3-202ENST00000428962 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 PDRG1Q9NUG6 133 aa16.43■□□□□ 0.22
THBS3-202ENST00000428962 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
THBS3-202ENST00000428962 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
THBS3-202ENST00000428962 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
THBS3-202ENST00000428962 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
THBS3-202ENST00000428962 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
THBS3-202ENST00000428962 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms