RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
SMC6-204ENST00000428868 SYNE4Q8N205 404 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 BICC1Q9H694 974 aaKnown RBP11.12□□□□□ -0.63
SMC6-204ENST00000428868 BCL2L12Q9HB09 334 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 CWC25Q9NXE8 425 aaPredicted RBP11.12□□□□□ -0.63
SMC6-204ENST00000428868 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
SMC6-204ENST00000428868 A0A087WZG4 1122 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 H7C1W4 665 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 PHF14O94880 888 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 PDE4AP27815 886 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 ZNF827Q17R98 1081 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 PPP1R42Q7Z4L9 355 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 NLRP10Q86W26 655 aa11.11□□□□□ -0.63
SMC6-204ENST00000428868 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
SMC6-204ENST00000428868 POLA2Q14181 598 aa11.1□□□□□ -0.63
SMC6-204ENST00000428868 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
SMC6-204ENST00000428868 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
SMC6-204ENST00000428868 DCTPP1Q9H773 170 aa11.1□□□□□ -0.63
SMC6-204ENST00000428868 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 APBB1O00213 710 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 PLSCR1O15162 318 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 SMARCA5O60264 1052 aaPredicted RBP11.09□□□□□ -0.63
SMC6-204ENST00000428868 RGS3P49796 1198 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 FOXO4P98177 505 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 USPL1Q5W0Q7 1092 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 DEFB132Q7Z7B7 95 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
SMC6-204ENST00000428868 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 AK7Q96M32 723 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 EXOC6BQ9Y2D4 811 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 LRP5O75197 1615 aa11.09□□□□□ -0.63
SMC6-204ENST00000428868 FAM177BA6PVY3 158 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 SRGAP3O43295 1099 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 NUCB1Q02818 461 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 SF3B2Q13435 895 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 MTX1Q13505 466 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 SUSD4Q5VX71 490 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
SMC6-204ENST00000428868 PA2G4Q9UQ80 394 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 RTCBQ9Y3I0 505 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
SMC6-204ENST00000428868 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
SMC6-204ENST00000428868 ARAP2Q8WZ64 1704 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 PCCAP05165 728 aaPredicted RBP11.07□□□□□ -0.64
SMC6-204ENST00000428868 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
SMC6-204ENST00000428868 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
SMC6-204ENST00000428868 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
SMC6-204ENST00000428868 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
SMC6-204ENST00000428868 MYO5AQ9Y4I1 1855 aaKnown RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 HMMRO75330 724 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 NTSR2O95665 410 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 OTUD7AQ8TE49 926 aaPredicted RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
SMC6-204ENST00000428868 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 NIP7Q9Y221 180 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMC6-204ENST00000428868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
SMC6-204ENST00000428868 ABCC12Q96J65 1359 aa11.05□□□□□ -0.64
SMC6-204ENST00000428868 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
SMC6-204ENST00000428868 CHD1LQ86WJ1 897 aa11.05□□□□□ -0.64
SMC6-204ENST00000428868 NUTM1Q86Y26 1132 aa11.05□□□□□ -0.64
SMC6-204ENST00000428868 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
SMC6-204ENST00000428868 ZBTB38Q8NAP3 1195 aaPredicted RBP11.05□□□□□ -0.64
SMC6-204ENST00000428868 CCDC85AQ96PX6 553 aaPredicted RBP11.05□□□□□ -0.64
SMC6-204ENST00000428868 TRMT112Q9UI30 125 aaKnown RBP11.05□□□□□ -0.64
SMC6-204ENST00000428868 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
SMC6-204ENST00000428868 MYH13Q9UKX3 1938 aa11.04□□□□□ -0.64
SMC6-204ENST00000428868 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
SMC6-204ENST00000428868 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
SMC6-204ENST00000428868 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
SMC6-204ENST00000428868 ZPR1O75312 459 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
SMC6-204ENST00000428868 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
SMC6-204ENST00000428868 SSFA2P28290 1259 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 RFC4P35249 363 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 CLEC4GQ6UXB4 293 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 C3orf67Q6ZVT6 689 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 CCDC24Q8N4L8 307 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
SMC6-204ENST00000428868 PLA2G12BQ9BX93 195 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 SIL1Q9H173 461 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 ZNF652Q9Y2D9 606 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 CHMP3Q9Y3E7 222 aa11.03□□□□□ -0.64
SMC6-204ENST00000428868 MYH7P12883 1935 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms