RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
HDLBP-216ENST00000428482 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
HDLBP-216ENST00000428482 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
HDLBP-216ENST00000428482 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
HDLBP-216ENST00000428482 H0YIN7 160 aa13.27□□□□□ -0.29
HDLBP-216ENST00000428482 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
HDLBP-216ENST00000428482 RNF181Q9P0P0 153 aa13.27□□□□□ -0.29
HDLBP-216ENST00000428482 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
HDLBP-216ENST00000428482 RGL2O15211 777 aa13.26□□□□□ -0.29
HDLBP-216ENST00000428482 PDE6BP35913 854 aa13.26□□□□□ -0.29
HDLBP-216ENST00000428482 G2E3Q7L622 706 aa13.26□□□□□ -0.29
HDLBP-216ENST00000428482 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
HDLBP-216ENST00000428482 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
HDLBP-216ENST00000428482 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-216ENST00000428482 ABCC4O15439 1325 aa13.24□□□□□ -0.29
HDLBP-216ENST00000428482 IL16Q14005 1332 aa13.24□□□□□ -0.29
HDLBP-216ENST00000428482 KLRG2A4D1S0 409 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-216ENST00000428482 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-216ENST00000428482 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
HDLBP-216ENST00000428482 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
HDLBP-216ENST00000428482 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-216ENST00000428482 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
HDLBP-216ENST00000428482 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
HDLBP-216ENST00000428482 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-216ENST00000428482 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
HDLBP-216ENST00000428482 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-216ENST00000428482 MYD88Q99836 296 aa13.23□□□□□ -0.29
HDLBP-216ENST00000428482 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
HDLBP-216ENST00000428482 NMRK2Q9NPI5 230 aa13.23□□□□□ -0.29
HDLBP-216ENST00000428482 NPR1P16066 1061 aa13.22□□□□□ -0.29
HDLBP-216ENST00000428482 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
HDLBP-216ENST00000428482 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
HDLBP-216ENST00000428482 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
HDLBP-216ENST00000428482 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-216ENST00000428482 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
HDLBP-216ENST00000428482 KIF3CO14782 793 aa13.21□□□□□ -0.29
HDLBP-216ENST00000428482 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-216ENST00000428482 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
HDLBP-216ENST00000428482 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
HDLBP-216ENST00000428482 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
HDLBP-216ENST00000428482 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
HDLBP-216ENST00000428482 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
HDLBP-216ENST00000428482 PCNTO95613 3336 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-216ENST00000428482 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-216ENST00000428482 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-216ENST00000428482 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
HDLBP-216ENST00000428482 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
HDLBP-216ENST00000428482 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
HDLBP-216ENST00000428482 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
HDLBP-216ENST00000428482 PSME4Q14997 1843 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 LMNB1P20700 586 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
HDLBP-216ENST00000428482 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
HDLBP-216ENST00000428482 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
HDLBP-216ENST00000428482 FLIIQ13045 1269 aa13.17□□□□□ -0.3
HDLBP-216ENST00000428482 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-216ENST00000428482 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
HDLBP-216ENST00000428482 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 F6X3S4 739 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 VAMP4O75379 141 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
HDLBP-216ENST00000428482 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 CELF1Q92879 486 aaKnown RBP13.16□□□□□ -0.3
HDLBP-216ENST00000428482 SCN4AP35499 1836 aa13.16□□□□□ -0.3
HDLBP-216ENST00000428482 HOXA10P31260 410 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-216ENST00000428482 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 12.2
HDLBP-216ENST00000428482 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-216ENST00000428482 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-216ENST00000428482 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
HDLBP-216ENST00000428482 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
HDLBP-216ENST00000428482 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-216ENST00000428482 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
HDLBP-216ENST00000428482 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
HDLBP-216ENST00000428482 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
HDLBP-216ENST00000428482 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-216ENST00000428482 GRAPQ13588 217 aa13.13□□□□□ -0.31
HDLBP-216ENST00000428482 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
HDLBP-216ENST00000428482 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-216ENST00000428482 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
HDLBP-216ENST00000428482 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
HDLBP-216ENST00000428482 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-216ENST00000428482 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
HDLBP-216ENST00000428482 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms