RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 H0YHG0 523 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 GOLGA6L19H0YKK7 550 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 U2SURPO15042 1029 aaKnown RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 ERC2O15083 957 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 SMC2O95347 1197 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 PNMA6AP0CW24 399 aaPredicted RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 SRPK2P78362 688 aaKnown RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 CUL4AQ13619 759 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 TUBB2AQ13885 445 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 FBXO38Q6PIJ6 1188 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 LAPTM4BQ86VI4 370 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 JMYQ8N9B5 988 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 TESK2Q96S53 571 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 TUBB2BQ9BVA1 445 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 TMX4Q9H1E5 349 aaPredicted RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 ARFGAP3Q9NP61 516 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 A1CFQ9NQ94 594 aaKnown RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZBTB40Q9NUA8 1239 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 DDX19AQ9NUU7 478 aaKnown RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 IMPACTQ9P2X3 320 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 SUFUQ9UMX1 484 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 FAM135BQ49AJ0 1406 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 DUOX2Q9NRD8 1548 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 GRXCR2A6NFK2 248 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 MAP3K7O43318 606 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 HCLS1P14317 486 aaPredicted RBP6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 MCM3P25205 808 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 NEDD9Q14511 834 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 CT47A1Q5JQC4 288 aaPredicted RBP6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZSCAN25Q6NSZ9 544 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 SARM1Q6SZW1 724 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 CCDC50Q8IVM0 306 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 TSC1Q92574 1164 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 MRFAP1L1Q96HT8 127 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 TRIM5Q9C035 493 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 NAT10Q9H0A0 1025 aaKnown RBP6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 MRVI1Q9Y6F6 885 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 RGS12O14924 1447 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 ARHGEF5Q12774 1597 aa6.57□□□□□ -1.36
VTI1BP4-201ENST00000427516 A0A1B0GUA9 196 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 GOLGA6L4A6NEF3 574 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 CTAGE5O15320 804 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 SETSIPP0DME0 302 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 CASTP20810 708 aaKnown RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 PDCP20941 246 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 OSBPP22059 807 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 CORO7P57737 925 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 SNW1Q13573 536 aaKnown RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 BRD3Q15059 726 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ELF2Q15723 593 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 DNAJC21Q5F1R6 531 aaKnown RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 NYAP1Q6ZVC0 841 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 KIAA1328Q86T90 577 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ANKRD18AQ8IVF6 992 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZNF592Q92610 1267 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZFRQ96KR1 1074 aaKnown RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 DRC1Q96MC2 740 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 PSMD1Q99460 953 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 USP26Q9BXU7 913 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 LNPKQ9C0E8 428 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 CLIP2Q9UDT6 1046 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 SEPT9Q9UHD8 586 aaPredicted RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 DNAI1Q9UI46 699 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZNF215Q9UL58 517 aaPredicted RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 PYCARDQ9ULZ3 195 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 FHOD1Q9Y613 1164 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 TROQ12816 1431 aaPredicted RBP6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ASXL2Q76L83 1435 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 ADGRB2O60241 1585 aa6.56□□□□□ -1.36
VTI1BP4-201ENST00000427516 TTC41PQ6P2S7 1318 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 ATXN2Q99700 1313 aaKnown RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 ERCC6Q03468 1493 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 MAGI2Q86UL8 1455 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 C21orf2O43822 256 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 TSPY4P0CV99 314 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 TSPY10P0CW01 314 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 PTGS1P23219 599 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 NF2P35240 595 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 SMC1AQ14683 1233 aaKnown RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 LRRFIP1Q32MZ4 808 aaKnown RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 ANKRD45Q5TZF3 282 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 GBP6Q6ZN66 633 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 CCDC186Q7Z3E2 898 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 TADA2BQ86TJ2 420 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 FCHSD1Q86WN1 690 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 CCDC146Q8IYE0 955 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 ANKK1Q8NFD2 765 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 TDRD7Q8NHU6 1098 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms