RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 RFX5P48382 616 aaPredicted RBP23.23■■□□□ 1.31
SNX17-202ENST00000427123 KLHDC4Q8TBB5 520 aa23.23■■□□□ 1.31
SNX17-202ENST00000427123 TJP1Q07157 1748 aa23.22■■□□□ 1.31
SNX17-202ENST00000427123 TNS2Q63HR2 1409 aa23.22■■□□□ 1.31
SNX17-202ENST00000427123 RASEFQ8IZ41 740 aa23.22■■□□□ 1.31
SNX17-202ENST00000427123 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
SNX17-202ENST00000427123 KCNB2Q92953 911 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 A0A087WZG4 1122 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 NBPF26B4DH59 902 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 CASP7P55210 303 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 NBPF10Q6P3W6 841 aaKnown RBP23.21■■□□□ 1.31
SNX17-202ENST00000427123 NBPF15Q8N660 670 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 SNRKQ9NRH2 765 aa23.21■■□□□ 1.31
SNX17-202ENST00000427123 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.31
SNX17-202ENST00000427123 ATP5J2-PTCD1G3V325 749 aa23.2■■□□□ 1.3
SNX17-202ENST00000427123 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
SNX17-202ENST00000427123 PTH1RQ03431 593 aa23.2■■□□□ 1.3
SNX17-202ENST00000427123 RTN4Q9NQC3 1192 aaKnown RBP23.2■■□□□ 1.3
SNX17-202ENST00000427123 TOGARAM1Q9Y4F4 1720 aa23.2■■□□□ 1.3
SNX17-202ENST00000427123 PTPN12Q05209 780 aaKnown RBP23.2■■□□□ 1.3
SNX17-202ENST00000427123 PANK2Q9BZ23 570 aa23.2■■□□□ 1.3
SNX17-202ENST00000427123 NMIQ13287 307 aaPredicted RBP23.18■■□□□ 1.3
SNX17-202ENST00000427123 JARID2Q92833 1246 aaPredicted RBP23.18■■□□□ 1.3
SNX17-202ENST00000427123 TM6SF1Q9BZW5 370 aa23.18■■□□□ 1.3
SNX17-202ENST00000427123 AK2P54819 239 aa23.18■■□□□ 1.3
SNX17-202ENST00000427123 GAS2L3Q86XJ1 694 aa23.18■■□□□ 1.3
SNX17-202ENST00000427123 FSD1Q9BTV5 496 aa23.18■■□□□ 1.3
SNX17-202ENST00000427123 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
SNX17-202ENST00000427123 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
SNX17-202ENST00000427123 FAM43AQ8N2R8 423 aa23.17■■□□□ 1.3
SNX17-202ENST00000427123 LIMCH1Q9UPQ0 1083 aa23.17■■□□□ 1.3
SNX17-202ENST00000427123 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
SNX17-202ENST00000427123 CASTP20810 708 aaKnown RBP23.16■■□□□ 1.3
SNX17-202ENST00000427123 PRPF40BQ6NWY9 871 aaKnown RBP23.16■■□□□ 1.3
SNX17-202ENST00000427123 RFX7Q2KHR2 1363 aa23.16■■□□□ 1.3
SNX17-202ENST00000427123 MED23Q9ULK4 1368 aa23.16■■□□□ 1.3
SNX17-202ENST00000427123 H7C1W4 665 aa23.16■■□□□ 1.3
SNX17-202ENST00000427123 PRPF40AO75400 957 aaKnown RBP23.16■■□□□ 1.3
SNX17-202ENST00000427123 NECTIN1Q15223 517 aa23.16■■□□□ 1.3
SNX17-202ENST00000427123 FAM227BQ96M60 508 aa23.16■■□□□ 1.3
SNX17-202ENST00000427123 CWC25Q9NXE8 425 aaPredicted RBP23.16■■□□□ 1.3
SNX17-202ENST00000427123 ATP5JP18859 108 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 TFCP2Q12800 502 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 RUFY3Q7L099 469 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 STRN4Q9NRL3 753 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 ZKSCAN1P17029 563 aaPredicted RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 EVA1CP58658 441 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 ZNF445P59923 1031 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 VPS53Q5VIR6 699 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 TTLL7Q6ZT98 887 aa23.15■■□□□ 1.3
SNX17-202ENST00000427123 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 JAKMIP1Q96N16 626 aaKnown RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 RBM8AQ9Y5S9 174 aaKnown RBP23.15■■□□□ 1.3
SNX17-202ENST00000427123 JCADQ9P266 1359 aa23.14■■□□□ 1.3
SNX17-202ENST00000427123 MAP4K1Q92918 833 aa23.14■■□□□ 1.29
SNX17-202ENST00000427123 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.29
SNX17-202ENST00000427123 FOXO4P98177 505 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 FOXD4L5Q5VV16 416 aaPredicted RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 FOXD4L4Q8WXT5 416 aaPredicted RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 CYP46A1Q9Y6A2 500 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 A0A0D9SFI3 127 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 NCLP19338 710 aaKnown RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 CREB3L3Q68CJ9 461 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 PDRG1Q9NUG6 133 aa23.13■■□□□ 1.29
SNX17-202ENST00000427123 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 RPAP1Q9BWH6 1393 aaPredicted RBP23.13■■□□□ 1.29
SNX17-202ENST00000427123 A1BGP04217 495 aa23.12■■□□□ 1.29
SNX17-202ENST00000427123 KCNJ4P48050 445 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 CCDC191Q8NCU4 936 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 GPT2Q8TD30 523 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 MBD3O95983 291 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 ADCK5Q3MIX3 580 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 ZSCAN23Q3MJ62 389 aa23.11■■□□□ 1.29
SNX17-202ENST00000427123 ZSCAN31Q96LW9 406 aaPredicted RBP23.11■■□□□ 1.29
SNX17-202ENST00000427123 RNF20Q5VTR2 975 aa23.1■■□□□ 1.29
SNX17-202ENST00000427123 SH2B1Q9NRF2 756 aaPredicted RBP23.1■■□□□ 1.29
SNX17-202ENST00000427123 CPA1P15085 419 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 TMOD3Q9NYL9 352 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 SLC27A2O14975 620 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 PSMA5P28066 241 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 CHAMP1Q96JM3 812 aa23.09■■□□□ 1.29
SNX17-202ENST00000427123 DBNDD2Q9BQY9 259 aa23.08■■□□□ 1.29
SNX17-202ENST00000427123 ZBTB3Q9H5J0 574 aa23.08■■□□□ 1.29
SNX17-202ENST00000427123 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
SNX17-202ENST00000427123 HAUS7Q99871 368 aa23.08■■□□□ 1.28
SNX17-202ENST00000427123 SMC3Q9UQE7 1217 aa23.08■■□□□ 1.28
SNX17-202ENST00000427123 GPR108Q9NPR9 543 aa23.07■■□□□ 1.28
SNX17-202ENST00000427123 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
SNX17-202ENST00000427123 COL14A1Q05707 1796 aaKnown RBP23.07■■□□□ 1.28
SNX17-202ENST00000427123 ITGB4P16144 1822 aa23.06■■□□□ 1.28
SNX17-202ENST00000427123 LARGE1O95461 756 aa23.06■■□□□ 1.28
SNX17-202ENST00000427123 EDC3Q96F86 508 aaKnown RBP23.06■■□□□ 1.28
SNX17-202ENST00000427123 PLCH1Q4KWH8 1693 aa23.05■■□□□ 1.28
SNX17-202ENST00000427123 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms