RNA–Protein interactions for RNA: ENST00000423615.6

VNN3-206, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-206ENST00000423615 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
VNN3-206ENST00000423615 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
VNN3-206ENST00000423615 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
VNN3-206ENST00000423615 PLSCR1O15162 318 aa13.09□□□□□ -0.31
VNN3-206ENST00000423615 HMMRO75330 724 aa13.09□□□□□ -0.31
VNN3-206ENST00000423615 EPHA10Q5JZY3 1008 aa13.09□□□□□ -0.31
VNN3-206ENST00000423615 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
VNN3-206ENST00000423615 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
VNN3-206ENST00000423615 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
VNN3-206ENST00000423615 H7C1W4 665 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
VNN3-206ENST00000423615 MTX1Q13505 466 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 POLA2Q14181 598 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
VNN3-206ENST00000423615 PPP1R42Q7Z4L9 355 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 COL4A1P02462 1669 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
VNN3-206ENST00000423615 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
VNN3-206ENST00000423615 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 ZNF652Q9Y2D9 606 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
VNN3-206ENST00000423615 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 ARAP2Q8WZ64 1704 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
VNN3-206ENST00000423615 NTSR2O95665 410 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 ADRA2BP18089 450 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 SSFA2P28290 1259 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 RGS3P49796 1198 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
VNN3-206ENST00000423615 DCTPP1Q9H773 170 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
VNN3-206ENST00000423615 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
VNN3-206ENST00000423615 PDE4AP27815 886 aa13.05□□□□□ -0.32
VNN3-206ENST00000423615 FOXO4P98177 505 aa13.05□□□□□ -0.32
VNN3-206ENST00000423615 NUCB1Q02818 461 aa13.05□□□□□ -0.32
VNN3-206ENST00000423615 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
VNN3-206ENST00000423615 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
VNN3-206ENST00000423615 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
VNN3-206ENST00000423615 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
VNN3-206ENST00000423615 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
VNN3-206ENST00000423615 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
VNN3-206ENST00000423615 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
VNN3-206ENST00000423615 TAF1P21675 1872 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 APBB1O00213 710 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 RGL2O15211 777 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 ZPR1O75312 459 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
VNN3-206ENST00000423615 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 SYNE4Q8N205 404 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
VNN3-206ENST00000423615 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
VNN3-206ENST00000423615 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 RFC4P35249 363 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
VNN3-206ENST00000423615 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
VNN3-206ENST00000423615 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
VNN3-206ENST00000423615 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
VNN3-206ENST00000423615 BAG6P46379 1132 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
VNN3-206ENST00000423615 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 LMBR1LQ6UX01 489 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 DEFB132Q7Z7B7 95 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
VNN3-206ENST00000423615 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
VNN3-206ENST00000423615 GYS1P13807 737 aa13.01□□□□□ -0.33
VNN3-206ENST00000423615 CTSWP56202 376 aa13.01□□□□□ -0.33
VNN3-206ENST00000423615 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
VNN3-206ENST00000423615 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
VNN3-206ENST00000423615 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
VNN3-206ENST00000423615 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
VNN3-206ENST00000423615 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
VNN3-206ENST00000423615 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
VNN3-206ENST00000423615 SIL1Q9H173 461 aa13□□□□□ -0.33
VNN3-206ENST00000423615 TFCP2L1Q9NZI6 479 aa13□□□□□ -0.33
VNN3-206ENST00000423615 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
VNN3-206ENST00000423615 ZNF609O15014 1411 aa12.99□□□□□ -0.33
VNN3-206ENST00000423615 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
VNN3-206ENST00000423615 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms