RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 ATL3Q6DD88 541 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 CASQ2O14958 399 aaPredicted RBP10.6□□□□□ -0.71
CD109-202ENST00000422508 ARHGAP25P42331 645 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 PRPF31Q8WWY3 499 aaKnown RBP10.6□□□□□ -0.71
CD109-202ENST00000422508 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 POGZQ7Z3K3 1410 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 LMAN1P49257 510 aa10.6□□□□□ -0.71
CD109-202ENST00000422508 MRPS9P82933 396 aaKnown RBP10.6□□□□□ -0.71
CD109-202ENST00000422508 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
CD109-202ENST00000422508 MAP3K1Q13233 1512 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 KANK4Q5T7N3 995 aaPredicted RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 B4DLN1 442 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 KRT86O43790 486 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 MRPL12P52815 198 aaKnown RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 MXRA7P84157 204 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 RAD50Q92878 1312 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 BICDL2A1A5D9 508 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 SSRP1Q08945 709 aaKnown RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 SMC1BQ8NDV3 1235 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 KCNG4Q8TDN1 519 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 C9orf84Q5VXU9 1444 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 MYO1BO43795 1136 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 URI1O94763 535 aaPredicted RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 IQCDQ96DY2 449 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 ELL2O00472 640 aaPredicted RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 SRGAP1Q7Z6B7 1085 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 VCX3AQ9NNX9 186 aa10.59□□□□□ -0.71
CD109-202ENST00000422508 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
CD109-202ENST00000422508 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 TAOK1Q7L7X3 1001 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 OTUD6BQ8N6M0 293 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 CEP120Q8N960 986 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.58□□□□□ -0.72
CD109-202ENST00000422508 IQGAP2Q13576 1575 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 ZBTB16Q05516 673 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 FYB2Q5VWT5 728 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 AACSQ86V21 672 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 HVCN1Q96D96 273 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 THEGQ9P2T0 379 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 HDXQ7Z353 690 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 NUP133Q8WUM0 1156 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 MTUS1Q9ULD2 1270 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 CCDC160A6NGH7 325 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 DNAJC8O75937 253 aaPredicted RBP10.58□□□□□ -0.72
CD109-202ENST00000422508 TMTC2Q8N394 836 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 PLCB1Q9NQ66 1216 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 SLC12A7Q9Y666 1083 aa10.58□□□□□ -0.72
CD109-202ENST00000422508 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 EXOC1Q9NV70 894 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 HAUS8Q9BT25 410 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 ATAD2BQ9ULI0 1458 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 PDZRN3Q9UPQ7 1066 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 TXNDC16Q9P2K2 825 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 NOB1Q9ULX3 412 aaKnown RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
CD109-202ENST00000422508 CEP126Q9P2H0 1117 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 CCDC194A0A1B0GVG4 234 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 TDRD12Q587J7 1177 aaKnown RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 SPTY2D1Q68D10 685 aaPredicted RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 CTAGE15A4D2H0 777 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 LUC7L3O95232 432 aaKnown RBP10.57□□□□□ -0.72
CD109-202ENST00000422508 CTAGE8P0CG41 777 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 ATP2B1P20020 1258 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 CTAGE6Q86UF2 777 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 CTAGE4Q8IX94 777 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
CD109-202ENST00000422508 PRC1O43663 620 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 TPD52P55327 224 aaPredicted RBP10.56□□□□□ -0.72
CD109-202ENST00000422508 TRIM14Q14142 442 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 CECR2Q9BXF3 1484 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 STARD3NLO95772 234 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 MTIF2P46199 727 aaKnown RBP10.56□□□□□ -0.72
CD109-202ENST00000422508 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.56□□□□□ -0.72
CD109-202ENST00000422508 CLGNO14967 610 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
CD109-202ENST00000422508 A0A1B0GUL7 405 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
CD109-202ENST00000422508 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms