RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 TM6SF1Q9BZW5 370 aa31.04■■■□□ 2.56
ITGA9-203ENST00000422441 ERBB4Q15303 1308 aa31.04■■■□□ 2.56
ITGA9-203ENST00000422441 CCDC171Q6TFL3 1326 aa31.04■■■□□ 2.56
ITGA9-203ENST00000422441 PKD1L3Q7Z443 1732 aa31.03■■■□□ 2.56
ITGA9-203ENST00000422441 PIP4K2AP48426 406 aaPredicted RBP31.03■■■□□ 2.56
ITGA9-203ENST00000422441 FAM227BQ96M60 508 aa31.03■■■□□ 2.56
ITGA9-203ENST00000422441 NMIQ13287 307 aaPredicted RBP31.03■■■□□ 2.56
ITGA9-203ENST00000422441 CADPS2Q86UW7 1296 aa31.03■■■□□ 2.56
ITGA9-203ENST00000422441 ZSWIM6Q9HCJ5 1215 aa31.03■■■□□ 2.56
ITGA9-203ENST00000422441 ANP32BQ92688 251 aaKnown RBP31.02■■■□□ 2.56
ITGA9-203ENST00000422441 JAKMIP1Q96N16 626 aaKnown RBP31.02■■■□□ 2.56
ITGA9-203ENST00000422441 SNRKQ9NRH2 765 aa31.02■■■□□ 2.56
ITGA9-203ENST00000422441 VPS53Q5VIR6 699 aa31.01■■■□□ 2.56
ITGA9-203ENST00000422441 BOLA2Q9H3K6 86 aa31.01■■■□□ 2.56
ITGA9-203ENST00000422441 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.01■■■□□ 2.56
ITGA9-203ENST00000422441 SPATA31A3Q5VYP0 1347 aa31.01■■■□□ 2.56
ITGA9-203ENST00000422441 LRSAM1Q6UWE0 723 aa31.01■■■□□ 2.55
ITGA9-203ENST00000422441 COPRSQ9NQ92 184 aa31■■■□□ 2.55
ITGA9-203ENST00000422441 PDRG1Q9NUG6 133 aa31■■■□□ 2.55
ITGA9-203ENST00000422441 ZBTB4Q9P1Z0 1013 aaPredicted RBP31■■■□□ 2.55
ITGA9-203ENST00000422441 MAP4K1Q92918 833 aa31■■■□□ 2.55
ITGA9-203ENST00000422441 SYCE3A1L190 88 aa30.99■■■□□ 2.55
ITGA9-203ENST00000422441 LARGE1O95461 756 aa30.99■■■□□ 2.55
ITGA9-203ENST00000422441 CABP4P57796 275 aa30.99■■■□□ 2.55
ITGA9-203ENST00000422441 FOXD4L6Q3SYB3 417 aaPredicted RBP30.99■■■□□ 2.55
ITGA9-203ENST00000422441 FOXD4L3Q6VB84 417 aaPredicted RBP30.99■■■□□ 2.55
ITGA9-203ENST00000422441 JARID2Q92833 1246 aaPredicted RBP30.99■■■□□ 2.55
ITGA9-203ENST00000422441 RBM8AQ9Y5S9 174 aaKnown RBP30.99■■■□□ 2.55
ITGA9-203ENST00000422441 CPDO75976 1380 aa30.99■■■□□ 2.55
ITGA9-203ENST00000422441 RFX5P48382 616 aaPredicted RBP30.99■■■□□ 2.55
ITGA9-203ENST00000422441 CYP46A1Q9Y6A2 500 aa30.99■■■□□ 2.55
ITGA9-203ENST00000422441 CREB3L3Q68CJ9 461 aa30.98■■■□□ 2.55
ITGA9-203ENST00000422441 USP48Q86UV5 1035 aa30.97■■■□□ 2.55
ITGA9-203ENST00000422441 GDPD2Q9HCC8 539 aa30.97■■■□□ 2.55
ITGA9-203ENST00000422441 ZSCAN22P10073 491 aaPredicted RBP30.96■■■□□ 2.55
ITGA9-203ENST00000422441 ZKSCAN1P17029 563 aaPredicted RBP30.96■■■□□ 2.55
ITGA9-203ENST00000422441 FSD1Q9BTV5 496 aa30.96■■■□□ 2.55
ITGA9-203ENST00000422441 SMC3Q9UQE7 1217 aa30.96■■■□□ 2.55
ITGA9-203ENST00000422441 COL15A1P39059 1388 aa30.96■■■□□ 2.55
ITGA9-203ENST00000422441 A0A0D9SFI3 127 aa30.96■■■□□ 2.55
ITGA9-203ENST00000422441 SYT1P21579 422 aa30.96■■■□□ 2.55
ITGA9-203ENST00000422441 PTPN12Q05209 780 aaKnown RBP30.96■■■□□ 2.55
ITGA9-203ENST00000422441 RABL6Q3YEC7 729 aaPredicted RBP30.96■■■□□ 2.55
ITGA9-203ENST00000422441 AFDNP55196 1824 aaKnown RBP30.96■■■□□ 2.55
ITGA9-203ENST00000422441 GADD45BO75293 160 aaPredicted RBP30.95■■■□□ 2.55
ITGA9-203ENST00000422441 ZSCAN31Q96LW9 406 aaPredicted RBP30.95■■■□□ 2.55
ITGA9-203ENST00000422441 TCHHQ07283 1943 aa30.95■■■□□ 2.55
ITGA9-203ENST00000422441 STX6O43752 255 aa30.95■■■□□ 2.54
ITGA9-203ENST00000422441 UBE3BQ7Z3V4 1068 aa30.95■■■□□ 2.54
ITGA9-203ENST00000422441 GLI3P10071 1580 aa30.94■■■□□ 2.54
ITGA9-203ENST00000422441 ARFGEF2Q9Y6D5 1785 aa30.94■■■□□ 2.54
ITGA9-203ENST00000422441 TMEM87AQ8NBN3 555 aa30.94■■■□□ 2.54
ITGA9-203ENST00000422441 ATP5J2-PTCD1G3V325 749 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 PTCD1O75127 700 aaKnown RBP30.93■■■□□ 2.54
ITGA9-203ENST00000422441 KCNJ4P48050 445 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 CCDC83Q8IWF9 413 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 SH2B1Q9NRF2 756 aaPredicted RBP30.93■■■□□ 2.54
ITGA9-203ENST00000422441 MED23Q9ULK4 1368 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 SLC27A2O14975 620 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 PLBD2Q8NHP8 589 aa30.93■■■□□ 2.54
ITGA9-203ENST00000422441 DDX54Q8TDD1 881 aaKnown RBP30.92■■■□□ 2.54
ITGA9-203ENST00000422441 A0A087WZG4 1122 aa30.91■■■□□ 2.54
ITGA9-203ENST00000422441 CASP7P55210 303 aa30.91■■■□□ 2.54
ITGA9-203ENST00000422441 TFCP2Q12800 502 aa30.91■■■□□ 2.54
ITGA9-203ENST00000422441 TNNI3KQ59H18 835 aa30.91■■■□□ 2.54
ITGA9-203ENST00000422441 DBNLQ9UJU6 430 aaKnown RBP30.91■■■□□ 2.54
ITGA9-203ENST00000422441 FPGT-TNNI3KV9GXZ4 949 aa30.91■■■□□ 2.54
ITGA9-203ENST00000422441 ATP5JP18859 108 aa30.9■■■□□ 2.54
ITGA9-203ENST00000422441 SYAP1Q96A49 352 aaPredicted RBP30.9■■■□□ 2.54
ITGA9-203ENST00000422441 PARP4Q9UKK3 1724 aaKnown RBP30.9■■■□□ 2.54
ITGA9-203ENST00000422441 LAMB4A4D0S4 1761 aa30.9■■■□□ 2.54
ITGA9-203ENST00000422441 ST3GAL1Q11201 340 aa30.9■■■□□ 2.54
ITGA9-203ENST00000422441 F13A1P00488 732 aa30.89■■■□□ 2.54
ITGA9-203ENST00000422441 GJB2P29033 226 aa30.89■■■□□ 2.54
ITGA9-203ENST00000422441 ME3Q16798 604 aa30.89■■■□□ 2.54
ITGA9-203ENST00000422441 CNPY2Q9Y2B0 182 aa30.89■■■□□ 2.54
ITGA9-203ENST00000422441 EDC3Q96F86 508 aaKnown RBP30.89■■■□□ 2.53
ITGA9-203ENST00000422441 PDLIM2Q96JY6 352 aa30.89■■■□□ 2.53
ITGA9-203ENST00000422441 PSMA5P28066 241 aa30.88■■■□□ 2.53
ITGA9-203ENST00000422441 NBPF26B4DH59 902 aa30.87■■■□□ 2.53
ITGA9-203ENST00000422441 NBPF14Q5TI25 921 aa30.87■■■□□ 2.53
ITGA9-203ENST00000422441 NBPF10Q6P3W6 841 aaKnown RBP30.87■■■□□ 2.53
ITGA9-203ENST00000422441 ZNF589Q86UQ0 364 aaPredicted RBP30.87■■■□□ 2.53
ITGA9-203ENST00000422441 NBPF15Q8N660 670 aa30.87■■■□□ 2.53
ITGA9-203ENST00000422441 JCADQ9P266 1359 aa30.87■■■□□ 2.53
ITGA9-203ENST00000422441 COL9A3Q14050 684 aaPredicted RBP30.87■■■□□ 2.53
ITGA9-203ENST00000422441 TPCN1Q9ULQ1 816 aa30.86■■■□□ 2.53
ITGA9-203ENST00000422441 RNF20Q5VTR2 975 aa30.86■■■□□ 2.53
ITGA9-203ENST00000422441 MTMR6Q9Y217 621 aa30.85■■■□□ 2.53
ITGA9-203ENST00000422441 WDR17Q8IZU2 1322 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 NECAB1Q8N987 351 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 ZCRB1Q8TBF4 217 aaKnown RBP30.84■■■□□ 2.53
ITGA9-203ENST00000422441 ATP6V1DQ9Y5K8 247 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 TAF6LQ9Y6J9 622 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 H7C1W4 665 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 DTNBO60941 627 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 TAF5LO75529 589 aa30.84■■■□□ 2.53
ITGA9-203ENST00000422441 PCDH11XQ9BZA7 1347 aa30.83■■■□□ 2.53
ITGA9-203ENST00000422441 PCDH11YQ9BZA8 1340 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms