RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 NEURL1BA8MQ27 555 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 BRD1O95696 1058 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 PHKG2P15735 406 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 EVA1CP58658 441 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 PDIA6Q15084 440 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 GOLGB1Q14789 3259 aaKnown RBP16.01■□□□□ 0.15
MCF2L-213ENST00000421756 GCKRQ14397 625 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 IFNL2Q8IZJ0 200 aa16.01■□□□□ 0.15
MCF2L-213ENST00000421756 STX6O43752 255 aa16■□□□□ 0.15
MCF2L-213ENST00000421756 GPTP24298 496 aa16■□□□□ 0.15
MCF2L-213ENST00000421756 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■■□ 21.9
MCF2L-213ENST00000421756 ME3Q16798 604 aa16■□□□□ 0.15
MCF2L-213ENST00000421756 GOLIM4O00461 696 aa15.99■□□□□ 0.15
MCF2L-213ENST00000421756 GUCY1B3Q02153 619 aa15.99■□□□□ 0.15
MCF2L-213ENST00000421756 CREB3L3Q68CJ9 461 aa15.99■□□□□ 0.15
MCF2L-213ENST00000421756 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
MCF2L-213ENST00000421756 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-213ENST00000421756 MCM2P49736 904 aa15.99■□□□□ 0.15
MCF2L-213ENST00000421756 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
MCF2L-213ENST00000421756 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 USP25Q9UHP3 1055 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 TPCN1Q9ULQ1 816 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
MCF2L-213ENST00000421756 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
MCF2L-213ENST00000421756 PTMSP20962 102 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
MCF2L-213ENST00000421756 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
MCF2L-213ENST00000421756 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 ARHGAP23Q9P227 1491 aa15.98■□□□□ 0.15
MCF2L-213ENST00000421756 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
MCF2L-213ENST00000421756 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
MCF2L-213ENST00000421756 HAND2P61296 217 aa15.97■□□□□ 0.15
MCF2L-213ENST00000421756 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
MCF2L-213ENST00000421756 C17orf53Q8N3J3 647 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-213ENST00000421756 ANKARQ7Z5J8 1434 aa15.97■□□□□ 0.15
MCF2L-213ENST00000421756 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
MCF2L-213ENST00000421756 RBM10P98175 930 aaKnown RBP15.96■□□□□ 0.15
MCF2L-213ENST00000421756 CKAP2LQ8IYA6 745 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 R3HCC1Q9Y3T6 440 aaKnown RBP15.96■□□□□ 0.15
MCF2L-213ENST00000421756 CCDC171Q6TFL3 1326 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 JAK2O60674 1132 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 ANAPC15P60006 121 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 SPC24Q8NBT2 197 aa15.96■□□□□ 0.15
MCF2L-213ENST00000421756 CCDC173Q0VFZ6 552 aa15.96■□□□□ 0.14
MCF2L-213ENST00000421756 ERC1Q8IUD2 1116 aa15.96■□□□□ 0.14
MCF2L-213ENST00000421756 PUS3Q9BZE2 481 aaKnown RBP15.96■□□□□ 0.14
MCF2L-213ENST00000421756 NWD1Q149M9 1564 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 ZSCAN22P10073 491 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-213ENST00000421756 CUL4AQ13619 759 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 LRRC24Q50LG9 513 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 NPHP4O75161 1426 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-213ENST00000421756 SLC27A2O14975 620 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 METTL22Q9BUU2 404 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-213ENST00000421756 TSPY26PQ9H489 355 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-213ENST00000421756 SLIT1O75093 1534 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 VPS53Q5VIR6 699 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
MCF2L-213ENST00000421756 FER1L4A9Z1Z3 1794 aa15.94■□□□□ 0.14
MCF2L-213ENST00000421756 CDC37L1Q7L3B6 337 aa15.94■□□□□ 0.14
MCF2L-213ENST00000421756 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
MCF2L-213ENST00000421756 CLCN1P35523 988 aa15.94■□□□□ 0.14
MCF2L-213ENST00000421756 RGPD2P0DJD1 1756 aa15.94■□□□□ 0.14
MCF2L-213ENST00000421756 HOXB7P09629 217 aa15.93■□□□□ 0.14
MCF2L-213ENST00000421756 WASHC4Q2M389 1173 aa15.93■□□□□ 0.14
MCF2L-213ENST00000421756 A0A087WWV3 80 aa15.93■□□□□ 0.14
MCF2L-213ENST00000421756 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
MCF2L-213ENST00000421756 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
MCF2L-213ENST00000421756 F13A1P00488 732 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
MCF2L-213ENST00000421756 TNNI3KQ59H18 835 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 BRF1Q92994 677 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 FPGT-TNNI3KV9GXZ4 949 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 NBPF14Q5TI25 921 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
MCF2L-213ENST00000421756 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 NCOA5Q9HCD5 579 aaKnown RBP15.92■□□□□ 0.14
MCF2L-213ENST00000421756 MBD3O95983 291 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 TTC14Q96N46 770 aa15.92■□□□□ 0.14
MCF2L-213ENST00000421756 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 ZNF445P59923 1031 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 TTLL5Q6EMB2 1281 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 TOPAZ1Q8N9V7 1692 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 ERCC4Q92889 916 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-213ENST00000421756 H3BQV1 296 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
MCF2L-213ENST00000421756 TTC12Q9H892 705 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms