RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CCDC69A6NI79 296 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 HSP90B1P14625 803 aaKnown RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 ZNF397Q8NF99 534 aaPredicted RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 ZBTB9Q96C00 473 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 MORC2Q9Y6X9 1032 aaPredicted RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 TTC21BQ7Z4L5 1316 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 PRR36Q9H6K5 1346 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 LRRC2Q9BYS8 371 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 CCDC8Q9H0W5 538 aaPredicted RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
PKP4-204ENST00000421462 PI4KAP2A4QPH2 592 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 PI4KAP1Q8N8J0 262 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
PKP4-204ENST00000421462 ACEP12821 1306 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 AACSQ86V21 672 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 EYA1Q99502 592 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 AOX1Q06278 1338 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 NMIQ13287 307 aaPredicted RBP19.61■□□□□ 0.73
PKP4-204ENST00000421462 TDRD7Q8NHU6 1098 aaKnown RBP19.61■□□□□ 0.73
PKP4-204ENST00000421462 IL17RAQ96F46 866 aa19.61■□□□□ 0.73
PKP4-204ENST00000421462 PDCP20941 246 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 SIL1Q9H173 461 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 BOLA2Q9H3K6 86 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 CCDC171Q6TFL3 1326 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 CLTCQ00610 1675 aaKnown RBP19.6■□□□□ 0.73
PKP4-204ENST00000421462 ERCC6LQ2NKX8 1250 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 TAF3Q5VWG9 929 aa19.6■□□□□ 0.73
PKP4-204ENST00000421462 CCDC9Q9Y3X0 531 aaKnown RBP19.6■□□□□ 0.73
PKP4-204ENST00000421462 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
PKP4-204ENST00000421462 NECTIN1Q15223 517 aa19.59■□□□□ 0.73
PKP4-204ENST00000421462 CCDC66A2RUB6 948 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 SLC27A2O14975 620 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.73
PKP4-204ENST00000421462 LRRN4CLQ8ND94 238 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 BRF1Q92994 677 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 ECHDC1Q9NTX5 307 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.73
PKP4-204ENST00000421462 MLH3Q9UHC1 1453 aa19.58■□□□□ 0.73
PKP4-204ENST00000421462 FSD1Q9BTV5 496 aa19.58■□□□□ 0.72
PKP4-204ENST00000421462 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
PKP4-204ENST00000421462 GUCY1B3Q02153 619 aa19.57■□□□□ 0.72
PKP4-204ENST00000421462 EDC3Q96F86 508 aaKnown RBP19.57■□□□□ 0.72
PKP4-204ENST00000421462 METP08581 1390 aa19.57■□□□□ 0.72
PKP4-204ENST00000421462 POLR3GO15318 223 aaPredicted RBP19.57■□□□□ 0.72
PKP4-204ENST00000421462 IL17REQ8NFR9 667 aa19.57■□□□□ 0.72
PKP4-204ENST00000421462 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
PKP4-204ENST00000421462 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
PKP4-204ENST00000421462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.57■□□□□ 0.72
PKP4-204ENST00000421462 A0A0D9SFI3 127 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 SYCP1Q15431 976 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 SYT10Q6XYQ8 523 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 NDUFB9Q9Y6M9 179 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 EPB41L2O43491 1005 aaKnown RBP19.56■□□□□ 0.72
PKP4-204ENST00000421462 POLA2Q14181 598 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 AOPEPQ8N6M6 819 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 TIGD1Q96MW7 591 aa19.56■□□□□ 0.72
PKP4-204ENST00000421462 ELP1O95163 1332 aa19.55■□□□□ 0.72
PKP4-204ENST00000421462 SLU7O95391 586 aaKnown RBP19.55■□□□□ 0.72
PKP4-204ENST00000421462 CCAR1Q8IX12 1150 aaKnown RBP19.55■□□□□ 0.72
PKP4-204ENST00000421462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.55■□□□□ 0.72
PKP4-204ENST00000421462 PSMA5P28066 241 aa19.55■□□□□ 0.72
PKP4-204ENST00000421462 GPATCH3Q96I76 525 aa19.55■□□□□ 0.72
PKP4-204ENST00000421462 SMC2O95347 1197 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 NOL10Q9BSC4 688 aaKnown RBP19.54■□□□□ 0.72
PKP4-204ENST00000421462 TUBGCP6Q96RT7 1819 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 CHGBP05060 677 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 TM6SF1Q9BZW5 370 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 ZNF446Q9NWS9 450 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
PKP4-204ENST00000421462 PDE4CQ08493 712 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 IQCB1Q15051 598 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 CCAR2Q8N163 923 aaKnown RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 TLR7Q9NYK1 1049 aaKnown RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 SNW1Q13573 536 aaKnown RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 FAM177A1Q8N128 213 aaPredicted RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 KLHDC4Q8TBB5 520 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 BIN1O00499 593 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 ISM2Q6H9L7 571 aa19.53■□□□□ 0.72
PKP4-204ENST00000421462 ZNF589Q86UQ0 364 aaPredicted RBP19.53■□□□□ 0.72
PKP4-204ENST00000421462 KCNQ3O43525 872 aa19.52■□□□□ 0.72
PKP4-204ENST00000421462 CCZ1BP86790 482 aa19.52■□□□□ 0.72
PKP4-204ENST00000421462 CCZ1P86791 482 aaPredicted RBP19.52■□□□□ 0.72
PKP4-204ENST00000421462 CWF19L2Q2TBE0 894 aaKnown RBP19.52■□□□□ 0.72
PKP4-204ENST00000421462 HSP90AB4PQ58FF6 505 aa19.52■□□□□ 0.72
PKP4-204ENST00000421462 EVI5LQ96CN4 794 aa19.52■□□□□ 0.72
PKP4-204ENST00000421462 RPS6KB1P23443 525 aa19.52■□□□□ 0.71
PKP4-204ENST00000421462 PTPN21Q16825 1174 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms