RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
HMGB1P49-201ENST00000418882 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
HMGB1P49-201ENST00000418882 STIM2Q9P246 746 aa8.61□□□□□ -1.03
HMGB1P49-201ENST00000418882 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
HMGB1P49-201ENST00000418882 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P49-201ENST00000418882 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
HMGB1P49-201ENST00000418882 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
HMGB1P49-201ENST00000418882 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
HMGB1P49-201ENST00000418882 MPSTP25325 297 aa8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 MAP2K3P46734 347 aa8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 ARSDP51689 593 aa8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 PCBP4P57723 403 aaKnown RBP8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 OXCT2Q9BYC2 517 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
HMGB1P49-201ENST00000418882 ABL1P00519 1130 aa8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 ZAP70P43403 619 aa8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 INSM1Q01101 510 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 ECM1Q16610 540 aa8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 ZNF468Q5VIY5 522 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 RGL4Q8IZJ4 473 aa8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
HMGB1P49-201ENST00000418882 NEURL1BA8MQ27 555 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 SHISA8B8ZZ34 492 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 ARHGEF15O94989 841 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 ARAFP10398 606 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 MDFIQ99750 246 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 KCNMB2Q9Y691 235 aa8.57□□□□□ -1.04
HMGB1P49-201ENST00000418882 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
HMGB1P49-201ENST00000418882 SYT9Q86SS6 491 aa8.56□□□□□ -1.04
HMGB1P49-201ENST00000418882 SVOPQ8N4V2 548 aa8.56□□□□□ -1.04
HMGB1P49-201ENST00000418882 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
HMGB1P49-201ENST00000418882 NPR3P17342 541 aa8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 EIF1AXP47813 144 aaKnown RBP8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 PRR12Q9ULL5 1215 aa8.55□□□□□ -1.04
HMGB1P49-201ENST00000418882 OIP5O43482 229 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 BRD1O95696 1058 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 BCRP11274 1271 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 PDE4CQ08493 712 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 KRT25Q7Z3Z0 450 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 BHMTQ93088 406 aa8.54□□□□□ -1.04
HMGB1P49-201ENST00000418882 ICMTO60725 284 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 EPXP11678 715 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 ADH6P28332 368 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 CCINQ13939 588 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 GOLGA6L1Q8N7Z2 621 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
HMGB1P49-201ENST00000418882 H3BRB1 525 aa8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 SASH3O75995 380 aa8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 NFKB1P19838 968 aa8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 FKBP4Q02790 459 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 GALNT6Q8NCL4 622 aa8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 TUT1Q9H6E5 874 aaKnown RBP8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 EGFL7Q9UHF1 273 aa8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P49-201ENST00000418882 FZD6O60353 706 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 SIN3BO75182 1162 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 XYLBO75191 536 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 EGFRP00533 1210 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 EPB42P16452 691 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 EDARADDQ8WWZ3 215 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 EDEM1Q92611 657 aa8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 GNEQ9Y223 722 aaKnown RBP8.51□□□□□ -1.05
HMGB1P49-201ENST00000418882 A6NHS1 94 aa8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 NUDT16Q96DE0 195 aaKnown RBP8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P49-201ENST00000418882 PDGFAP04085 211 aa8.49□□□□□ -1.05
HMGB1P49-201ENST00000418882 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
HMGB1P49-201ENST00000418882 TNFRSF25Q93038 417 aa8.49□□□□□ -1.05
HMGB1P49-201ENST00000418882 GGNBP2Q9H3C7 697 aa8.49□□□□□ -1.05
HMGB1P49-201ENST00000418882 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
HMGB1P49-201ENST00000418882 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 FAM13AO94988 1023 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 LRRC4BQ9NT99 713 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 POLIQ9UNA4 740 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 IVNS1ABPQ9Y6Y0 642 aa8.48□□□□□ -1.05
HMGB1P49-201ENST00000418882 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 ZBTB42B2RXF5 422 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 ADH7P40394 386 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 SNRPNP63162 240 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms